Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC069240.1-201ENST00000548774 375 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 CBX3P5-201ENST00000552017 521 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 MTND6P33-201ENST00000571794 183 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC060780.3-201ENST00000589464 80 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AC104662.1-201ENST00000604448 511 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 AL360181.4-201ENST00000621752 134 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 ZNF285B-201ENST00000561698 1767 ntBASIC4.44□□□□□ -1.7
VTA1Q9NP79 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VTA1Q9NP79 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VTA1Q9NP79 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VTA1Q9NP79 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 RNA5SP119-201ENST00000362715 117 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 RNU6-179P-201ENST00000363350 107 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 RNU6-996P-201ENST00000365438 107 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC138393.2-201ENST00000414742 246 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 YME1L1P1-201ENST00000429435 297 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 NEK4P1-201ENST00000433383 879 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 MTATP6P16-201ENST00000434543 526 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 RPS15AP9-201ENST00000439856 381 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AL353748.1-201ENST00000440753 474 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC010631.1-201ENST00000474150 156 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC078785.3-201ENST00000476607 425 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC006517.1-201ENST00000480485 328 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC078817.1-201ENST00000492623 435 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC025445.1-201ENST00000502728 300 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 HMGB1P22-201ENST00000505315 124 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 RNU1-95P-201ENST00000516357 160 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 RNU1-128P-201ENST00000516704 160 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 ERHP1-201ENST00000523006 310 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AL121579.1-201ENST00000555129 305 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC034105.3-201ENST00000565294 442 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC007998.5-201ENST00000622938 237 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VTA1Q9NP79 AC006020.1-201ENST00000420179 1854 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTA1Q9NP79 MARK2P15-201ENST00000432204 2186 ntBASIC4.43□□□□□ -1.7
VTA1Q9NP79 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL133412.1-201ENST00000380194 2992 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 DEFB108F-201ENST00000344638 222 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 MIR208A-201ENST00000362287 71 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 SNORA5A-201ENST00000384111 134 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 MIR7-3-201ENST00000384898 110 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 SNORA3C-201ENST00000408792 125 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 RNU2-29P-201ENST00000410423 189 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 CRYBB2P1-203ENST00000415709 538 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 CALM2P2-201ENST00000428512 440 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 RPL21P112-201ENST00000434403 463 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC083863.1-201ENST00000438811 231 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 MRPS17P3-201ENST00000465453 385 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 S100A11P1-201ENST00000477525 312 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC026427.2-201ENST00000506228 536 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 PCBP2P3-201ENST00000509726 843 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.42□□□□□ -1.7
VTA1Q9NP79 AC109635.4-202ENST00000531666 412 ntBASIC4.42□□□□□ -1.7
VTA1Q9NP79 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms