Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MTND1P37-201ENST00000636562 264 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 MTCO1P12-201ENST00000414273 1543 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 AL356473.1-201ENST00000406203 1408 ntBASIC2.17□□□□□ -2.06
VCX3AQ9NNX9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 RNU6-343P-201ENST00000364709 104 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 MIR9-1-201ENST00000385198 89 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 RPL23AP29-201ENST00000397284 453 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL161449.1-201ENST00000414531 1199 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AC004975.1-201ENST00000428733 208 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 UBE2FP3-201ENST00000436366 524 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 OR10R1P-201ENST00000441524 1141 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 RPS24P13-201ENST00000442520 397 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AC109486.1-201ENST00000486833 374 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AC093801.2-201ENST00000503966 1050 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 NRON-201ENST00000517270 370 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 OR11H5P-201ENST00000554039 926 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AC136601.2-201ENST00000604356 474 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 AL159972.1-201ENST00000625150 448 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VCX3AQ9NNX9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
VCX3AQ9NNX9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.15□□□□□ -2.06
VCX3AQ9NNX9 MTND5P1-201ENST00000445440 1375 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 MTND4P27-201ENST00000450813 1354 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RNU1-112P-201ENST00000364401 164 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL138885.1-201ENST00000405921 675 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RNU2-33P-201ENST00000410344 192 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 TPMTP2-201ENST00000414372 726 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL109913.1-201ENST00000421173 514 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 BX119904.4-201ENST00000424402 301 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC002381.1-201ENST00000447049 280 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL139109.1-201ENST00000455491 297 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 ATG12P2-201ENST00000456830 416 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL121769.1-201ENST00000469473 401 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC004263.1-201ENST00000479327 332 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RN7SL504P-201ENST00000494496 287 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC114981.1-201ENST00000503897 678 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC026427.2-201ENST00000506228 536 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 COL6A4P2-205ENST00000509855 506 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC098591.2-201ENST00000510152 315 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC096725.1-201ENST00000514266 313 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 RN7SKP31-201ENST00000516354 278 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC109329.2-201ENST00000519658 482 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC104417.1-201ENST00000523974 751 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 OR5AQ1P-201ENST00000527596 927 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 OR4K7P-201ENST00000580232 945 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC069304.2-201ENST00000605154 435 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 SNORD14A-201ENST00000606526 91 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AC005332.10-201ENST00000612725 619 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 AL365361.1-201ENST00000566942 3481 ntBASIC2.15□□□□□ -2.07
VCX3AQ9NNX9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 RNU5B-4P-201ENST00000363508 111 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 SNORA3A-201ENST00000364113 130 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 MIR554-201ENST00000384874 96 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 RNU6-750P-201ENST00000390946 107 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AL356057.3-201ENST00000402607 340 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 SNORA11B-201ENST00000408175 129 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 SEPT2P1-201ENST00000419651 180 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 USP9YP22-201ENST00000438971 294 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 ANKRD26P4-201ENST00000455755 950 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 RPL26P9-201ENST00000457466 433 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 SNORD121B-201ENST00000458838 81 ntBASIC2.14□□□□□ -2.07
VCX3AQ9NNX9 RPL30P9-201ENST00000465586 330 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms