Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC013468.1-201ENST00000608680 598 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC006329.2-201ENST00000611491 394 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC083865.1-201ENST00000636634 831 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC017104.5-201ENST00000637647 639 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC008568.2-201ENST00000623862 2313 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 AC131280.1-202ENST00000624067 4211 ntBASIC1.6□□□□□ -2.15
KIAA1549Q9HCM3 RNU6-77P-201ENST00000410554 91 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 snoU13.28-201ENST00000459235 104 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 MTCO3P42-201ENST00000509488 518 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 CDC42P4-201ENST00000510507 563 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 MTCO3P39-201ENST00000514812 518 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 SCARNA17.1-201ENST00000516211 143 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 SCARNA17.2-201ENST00000516334 143 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 GLYCAM1-201ENST00000546596 285 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AC009127.3-201ENST00000570531 403 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AL669831.4-202ENST00000590817 238 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AP000942.3-201ENST00000603702 160 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AC022387.2-201ENST00000604050 448 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AC025594.3-201ENST00000613068 790 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 SCARNA17.4-201ENST00000614296 143 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 AC018926.3-201ENST00000618841 406 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 OR5H6-203ENST00000642105 978 ntBASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KIAA1549Q9HCM3 MIR17-201ENST00000385012 84 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RNA5SP56-201ENST00000410277 118 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RNU4-72P-201ENST00000410754 173 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 ARL2BPP3-201ENST00000421226 480 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RPL36P19-201ENST00000430744 301 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 UBE2FP3-201ENST00000436366 524 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 USP9YP15-201ENST00000442391 422 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RPL23AP70-201ENST00000483361 460 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC090453.1-201ENST00000495560 436 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC011352.3-201ENST00000505162 593 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC022634.1-201ENST00000520765 532 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC073569.3-201ENST00000619055 682 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 AC027309.3-201ENST00000623419 351 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 CENPCP1-201ENST00000533085 2578 ntBASIC1.59□□□□□ -2.16
KIAA1549Q9HCM3 RNA5SP258-201ENST00000362750 119 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC114973.1-201ENST00000429057 632 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AL645568.3-201ENST00000433683 316 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 PGBD4P3-201ENST00000440731 581 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 IPO7P1-201ENST00000442031 636 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC015908.1-201ENST00000478739 476 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AL135752.1-201ENST00000479477 471 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 SNORA70.16-201ENST00000516390 95 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC083923.1-201ENST00000523708 376 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 ATP5F1P5-201ENST00000526403 760 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC025588.4-201ENST00000615802 908 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AL158801.5-201ENST00000623123 465 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 SNORA51.12-201ENST00000384448 134 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 LUZP4P1-201ENST00000415420 344 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 RPL7P37-201ENST00000425095 738 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC108734.3-201ENST00000481241 1165 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 RNU6-1282P-201ENST00000516735 96 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 MIR514B-201ENST00000516774 80 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.58□□□□□ -2.16
KIAA1549Q9HCM3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms