Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 SAMMSON-226ENST00000642089 1582 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 HSPA8P4-201ENST00000511877 1920 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 Y_RNA.404-201ENST00000383978 102 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 RNU6-434P-201ENST00000384376 107 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 RNU6-505P-201ENST00000384427 107 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 SNORA75.6-201ENST00000391318 127 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 HMGB3P2-201ENST00000411913 584 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 AL590632.1-201ENST00000424289 371 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 MTCYBP10-201ENST00000424905 650 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 NRBF2P3-201ENST00000432731 865 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 CYCSP43-201ENST00000438233 310 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AL731563.1-201ENST00000442202 214 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 FABP5P13-201ENST00000452144 328 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC010469.1-201ENST00000463864 576 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC104472.2-201ENST00000469035 601 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC087884.1-201ENST00000469738 328 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 RPL36AP41-201ENST00000493820 306 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 Y_RNA.670-201ENST00000516255 105 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 RN7SKP66-201ENST00000516681 231 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC110588.1-201ENST00000559699 137 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC008269.2-201ENST00000561915 1105 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 MIR4697-201ENST00000582977 78 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC067852.4-201ENST00000590314 478 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AC018462.2-201ENST00000605375 395 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 AL122125.1-201ENST00000616999 600 ntBASIC5.08□□□□□ -1.6
CBX8Q9HC52 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CBX8Q9HC52 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CBX8Q9HC52 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX8Q9HC52 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX8Q9HC52 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX8Q9HC52 RNY1P14-201ENST00000384426 108 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 MIR513A2-201ENST00000385249 127 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 RNU4-6P-201ENST00000410804 122 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC114482.1-201ENST00000418010 247 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 MRPS18BP2-201ENST00000434310 759 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 HIGD1AP11-201ENST00000438361 280 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC011753.3-201ENST00000443436 406 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC026801.2-201ENST00000515352 425 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 SNORD116-26-201ENST00000516006 96 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 Y_RNA.708-201ENST00000516950 96 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 RN7SKP234-201ENST00000517173 224 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC010653.1-201ENST00000571108 881 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 RN7SL652P-201ENST00000577769 300 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC067852.3-201ENST00000589177 561 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC073539.2-201ENST00000597113 165 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC012669.1-201ENST00000603209 283 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AL391358.1-201ENST00000605342 190 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC009229.3-201ENST00000608056 282 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 ATP5A1P2-202ENST00000616464 443 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 FAM91A3P-201ENST00000456826 2544 ntBASIC5.07□□□□□ -1.6
CBX8Q9HC52 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CBX8Q9HC52 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.07□□□□□ -1.6
CBX8Q9HC52 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX8Q9HC52 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX8Q9HC52 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX8Q9HC52 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CBX8Q9HC52 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.06□□□□□ -1.6
CBX8Q9HC52 AC139769.1-204ENST00000472297 1931 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 RNU1-15P-201ENST00000353977 144 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 RNU6-263P-201ENST00000363811 107 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 SNORA56-201ENST00000383966 129 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 Y_RNA.496-201ENST00000384444 101 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 RNU6-14P-201ENST00000384630 106 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 RNU6-178P-201ENST00000384631 104 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 Y_RNA.557-201ENST00000384680 107 ntBASIC5.06□□□□□ -1.6
CBX8Q9HC52 MIR765-201ENST00000390226 114 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms