Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS11Q9H270 RPL23AP43-201ENST00000446445 471 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AC073415.1-201ENST00000449240 153 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL451050.1-201ENST00000450126 415 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS11Q9H270 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS11Q9H270 RN7SL610P-201ENST00000463845 291 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AC021382.1-201ENST00000483523 359 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AC004453.1-201ENST00000487895 408 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS11Q9H270 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS11Q9H270 RPL7P20-201ENST00000520308 745 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AP001804.3-201ENST00000525146 880 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 AC126177.3-201ENST00000551839 688 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS11Q9H270 MIR4443-201ENST00000585052 53 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS11Q9H270 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS11Q9H270 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 AL590099.1-201ENST00000615276 138 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 MIR7155-201ENST00000615925 56 ntBASIC4.41□□□□□ -1.7
VPS11Q9H270 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS11Q9H270 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS11Q9H270 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS11Q9H270 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS11Q9H270 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS11Q9H270 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
VPS11Q9H270 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS11Q9H270 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
VPS11Q9H270 RNU1-35P-201ENST00000362782 153 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-522P-201ENST00000364497 107 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-996P-201ENST00000365438 107 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-629P-201ENST00000384061 103 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 MIR659-201ENST00000384963 97 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
VPS11Q9H270 MIR1911-201ENST00000410783 80 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-370P-201ENST00000411008 104 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS11Q9H270 AL137014.1-201ENST00000420490 1226 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 UQCRBP1-201ENST00000421129 336 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AL356010.1-201ENST00000456364 102 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 SNORD121B-201ENST00000458838 81 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU7-66P-201ENST00000459469 62 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RN7SL585P-201ENST00000470538 280 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AC093270.2-201ENST00000486157 792 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-388P-201ENST00000517012 105 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RNU6-389P-201ENST00000517048 105 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 MYL12BP1-201ENST00000569826 507 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC091042.1-201ENST00000579213 173 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 CYP2C61P-201ENST00000604072 290 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AL022345.1-201ENST00000607292 135 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 AL157817.1-201ENST00000614264 790 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS11Q9H270 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS11Q9H270 MAPK10-253ENST00000641010 4072 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS11Q9H270 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS11Q9H270 AC016588.2-201ENST00000632484 3021 ntBASIC4.4□□□□□ -1.71
VPS11Q9H270 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC004925.1-201ENST00000624256 2706 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS11Q9H270 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 MTND5P27-201ENST00000428871 1720 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 RNU5E-8P-201ENST00000363502 116 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 SNORA7.2-201ENST00000364446 145 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 RNA5SP167-201ENST00000365461 116 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AL645927.1-201ENST00000396783 406 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 SNORA11B-201ENST00000408175 129 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 MIR548F5-201ENST00000408421 86 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 RPL31P12-201ENST00000422587 358 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 MTCYBP10-201ENST00000424905 650 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC008267.5-201ENST00000424928 265 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 GPR143P-201ENST00000434155 205 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms