Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF38Q9H0F5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RNU6-1249P-201ENST00000363237 111 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.112-201ENST00000363250 102 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RNU6-188P-201ENST00000364207 107 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL136372.1-201ENST00000403060 228 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RNU2-47P-201ENST00000410649 186 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 HMGN1P24-201ENST00000412282 298 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC011998.1-201ENST00000433403 117 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 TXNP1-201ENST00000441872 371 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC104058.1-201ENST00000448028 297 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 CYCSP34-201ENST00000458172 304 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 FTH1P2-201ENST00000466086 412 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RN7SL41P-201ENST00000476144 297 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RNU6-256P-201ENST00000516747 97 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 TRAV8-5-201ENST00000537369 341 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL133271.1-201ENST00000538229 291 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 IMMP1LP2-201ENST00000552954 492 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC138761.3-201ENST00000579993 334 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 MIR3672-201ENST00000584290 82 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC073539.2-201ENST00000597113 165 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 ARF4P1-201ENST00000605447 541 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC083806.3-201ENST00000614016 455 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL445567.2-201ENST00000618935 498 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC018529.3-201ENST00000624212 2254 ntBASIC4.63□□□□□ -1.67
RNF38Q9H0F5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF38Q9H0F5 AL672167.1-203ENST00000641299 2975 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 RNU1-132P-201ENST00000364300 164 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 RNU6-601P-201ENST00000384540 107 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 MIR3065-201ENST00000390137 79 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 MIR548F4-201ENST00000408515 105 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 RNA5SP146-201ENST00000410743 123 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC114491.1-201ENST00000416095 246 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 SKA2P1-201ENST00000425592 390 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 NUTF2P3-201ENST00000448540 384 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 NUTF2P7-201ENST00000453086 375 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 ELOCP24-201ENST00000456370 334 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC091167.1-201ENST00000492017 396 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 MTCO2P24-201ENST00000515611 426 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC090136.1-201ENST00000520009 240 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 FAM60DP-201ENST00000524174 632 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AP000857.1-201ENST00000532151 543 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC091979.2-201ENST00000607514 214 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC012409.4-201ENST00000612923 249 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AL157817.1-201ENST00000614264 790 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms