Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM4Q9C037 OR4P1P-201ENST00000530808 1136 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 OR8K4P-201ENST00000534608 872 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC026464.5-201ENST00000562497 722 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AP004247.3-201ENST00000608682 624 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC092954.1-201ENST00000609121 445 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AC025016.1-201ENST00000616746 682 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 AL590396.2-201ENST00000636511 1041 ntBASIC2.15□□□□□ -2.07
TRIM4Q9C037 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM4Q9C037 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 RNU6-461P-201ENST00000364195 107 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 RNU6-173P-201ENST00000364215 104 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM4Q9C037 MIR7-2-201ENST00000384970 110 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 SNORD23.1-201ENST00000408212 104 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 RNU6-193P-201ENST00000410977 107 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AL589880.1-201ENST00000448271 287 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 RNU7-26P-201ENST00000458980 63 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 VPS26AP1-201ENST00000483197 979 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC104090.1-201ENST00000506341 1171 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 CASP1P1-201ENST00000526345 212 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC090888.1-201ENST00000561335 1141 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 MIR3935-201ENST00000583472 104 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC055876.5-201ENST00000605667 259 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM4Q9C037 AC004520.1-201ENST00000608362 1413 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 MTND5P29-201ENST00000458676 1807 ntBASIC2.14□□□□□ -2.07
TRIM4Q9C037 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRIM4Q9C037 MTND4P35-201ENST00000604257 1375 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 MIR337-201ENST00000362281 93 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM4Q9C037 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 RNU6-40P-201ENST00000384254 107 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 MIR499A-201ENST00000384903 122 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 HMGB3P31-201ENST00000413333 595 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 TATDN1P1-201ENST00000414123 891 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 CYCSP49-201ENST00000420810 319 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC004866.2-201ENST00000438285 481 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 RPS26P30-201ENST00000443431 335 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 HMGN3P1-201ENST00000453847 193 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC097493.1-201ENST00000463958 372 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 RPL31P41-201ENST00000477967 372 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 XKRY-201ENST00000510392 1100 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 RNU2-44P-201ENST00000516795 194 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC068339.2-201ENST00000534395 618 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC011260.1-201ENST00000578420 472 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 MIR8070-201ENST00000616510 88 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AL162233.1-201ENST00000620014 944 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 UCA1.1-201ENST00000620952 75 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC098679.5-201ENST00000624394 571 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM4Q9C037 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.13□□□□□ -2.07
TRIM4Q9C037 AC008432.1-201ENST00000615912 1320 ntBASIC2.13□□□□□ -2.07
TRIM4Q9C037 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM4Q9C037 U3.29-201ENST00000391296 212 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AL513475.1-201ENST00000406602 315 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC009237.2-201ENST00000421358 284 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AL365496.1-201ENST00000426885 215 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC092573.2-201ENST00000434546 243 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 MTND4LP10-201ENST00000435146 291 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 SNRPGP9-201ENST00000456025 225 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC004263.1-201ENST00000479327 332 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC109486.1-201ENST00000486833 374 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM4Q9C037 HSPE1P3-201ENST00000559254 309 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AGGF1P5-201ENST00000567900 919 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC105137.2-201ENST00000569073 466 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC074051.3-201ENST00000570238 358 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC012443.1-201ENST00000605605 231 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC013562.2-201ENST00000611632 603 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AP006248.3-201ENST00000623580 594 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 AC091932.3-201ENST00000624223 323 ntBASIC2.12□□□□□ -2.07
TRIM4Q9C037 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms