Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SALL3Q9BXA9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.28□□□□□ -1.72
SALL3Q9BXA9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SALL3Q9BXA9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SALL3Q9BXA9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR423-201ENST00000362201 94 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RNU6-1120P-201ENST00000362988 108 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.157-201ENST00000363638 102 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RNU6-1227P-201ENST00000383981 107 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR649-201ENST00000384843 97 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR124-3-201ENST00000384866 87 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 DHFRP6-201ENST00000401776 268 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR1302-11-201ENST00000408051 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR1302-9-201ENST00000408365 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR1302-10-201ENST00000408734 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RN7SKP111-201ENST00000410349 271 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RNU6-373P-201ENST00000411247 98 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC127526.1-201ENST00000417526 366 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC091390.3-201ENST00000426478 338 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 GTF2IP20-201ENST00000431663 360 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 FAM103A2P-201ENST00000444122 354 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC007677.1-201ENST00000445757 515 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MTND1P18-201ENST00000448191 573 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 HMGN1P13-201ENST00000505795 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RN7SKP18-201ENST00000516005 275 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 Y_RNA.675-201ENST00000516389 149 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC022616.6-201ENST00000520479 119 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC018638.8-201ENST00000588755 281 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC005498.1-201ENST00000592125 465 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC010680.4-201ENST00000605334 543 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MIR1302-2-201ENST00000607096 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC244100.1-202ENST00000621554 382 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 YWHAEP7-203ENST00000622054 312 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC009161.2-201ENST00000624626 138 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC010149.2-201ENST00000637608 315 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AC032011.1-201ENST00000611703 1549 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL157700.1-201ENST00000561973 1432 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 AL049780.3-201ENST00000624612 1583 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 NMD3P1-201ENST00000439704 1488 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
SALL3Q9BXA9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SALL3Q9BXA9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AL365440.1-201ENST00000436135 2167 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AL136964.1-201ENST00000622038 2990 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AC090337.1-201ENST00000579651 2074 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MIR208A-201ENST00000362287 71 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-451P-201ENST00000362921 107 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 SNORA51.2-201ENST00000364595 132 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AP002088.1-201ENST00000382740 395 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 SNORA51.6-201ENST00000384151 125 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-921P-201ENST00000384361 107 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-441P-201ENST00000384545 106 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MIR449B-201ENST00000384995 97 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 SNORD17-201ENST00000390930 237 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MRPL50P2-201ENST00000416821 482 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MTATP6P18-201ENST00000417994 673 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MTCO2P5-201ENST00000422621 426 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 PRSS3P4-201ENST00000453323 162 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-261P-201ENST00000459506 102 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RPL7P15-201ENST00000461190 712 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 PABPC1P3-201ENST00000469174 459 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MTND5P5-201ENST00000503764 376 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 MIR2276-201ENST00000516886 89 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-714P-201ENST00000516963 103 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 RNU6-835P-201ENST00000516974 104 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 ZNF705CP-201ENST00000530515 889 ntBASIC4.26□□□□□ -1.73
SALL3Q9BXA9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.26□□□□□ -1.73
SALL3Q9BXA9 SUB1P2-201ENST00000556401 297 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms