Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 MRPS36P1-201ENST00000421291 307 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC019178.2-201ENST00000423595 505 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 MTATP6P4-201ENST00000427725 675 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 GTF2IP3-201ENST00000433887 494 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 RAC1P7-201ENST00000445367 377 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AL353691.1-201ENST00000451332 387 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC073901.1-201ENST00000462471 408 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AP000852.1-201ENST00000472460 573 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 SNORA19.3-201ENST00000516165 130 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 HSPA8P13-201ENST00000523715 472 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC118942.1-201ENST00000529674 1035 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC078814.3-201ENST00000553036 491 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC025281.1-201ENST00000567026 265 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AL022067.1-201ENST00000602426 454 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AL049779.4-201ENST00000604500 156 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC067747.1-201ENST00000608026 250 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 ZNF271P-202ENST00000465539 1970 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 CDR1-202ENST00000625883 1485 ntBASIC2.89□□□□□ -1.95
RPAP1Q9BWH6 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 MIR135A2-201ENST00000384854 100 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 RNU6-882P-201ENST00000391025 103 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AL356131.1-201ENST00000405826 414 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 BEND7P1-201ENST00000422058 457 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 IFNA11P-201ENST00000446352 526 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC108734.3-201ENST00000481241 1165 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC023424.2-201ENST00000493479 777 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 TMEM251P1-201ENST00000503717 318 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 RNU6-1225P-201ENST00000516336 65 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AADACP1-206ENST00000561502 1193 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC080013.4-201ENST00000607624 649 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC024257.5-201ENST00000612739 531 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC023158.2-201ENST00000614876 543 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC084824.4-201ENST00000620106 731 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC123767.1-202ENST00000620407 817 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 AC104985.3-201ENST00000623479 597 ntBASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RPAP1Q9BWH6 MIR21-201ENST00000362134 72 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 RNU4-51P-201ENST00000364206 140 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MIR493-201ENST00000385254 89 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 RPS3AP26-201ENST00000398259 784 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC129850.1-201ENST00000436203 508 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 FAM103A2P-201ENST00000444122 354 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MTCO3P11-201ENST00000455103 774 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 HMGB1P28-201ENST00000507778 552 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 SNORA70.16-201ENST00000516390 95 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 HIGD1AP17-201ENST00000554576 276 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 OR4K8P-201ENST00000578842 1048 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC069304.2-201ENST00000605154 435 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC025588.4-201ENST00000615802 908 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AL158163.2-201ENST00000619110 700 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC106858.1-201ENST00000637497 429 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC097714.1-201ENST00000511272 1647 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MIR764-201ENST00000390811 85 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 RNU6-482P-201ENST00000391068 107 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MTATP6P27-201ENST00000416987 621 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AL603825.1-201ENST00000438481 80 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AL353705.4-201ENST00000449661 238 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC104982.1-201ENST00000478775 574 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC112206.4-201ENST00000515142 405 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 RNU6-276P-201ENST00000516114 96 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC010376.1-201ENST00000522101 334 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC015688.2-201ENST00000584523 262 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC046143.2-201ENST00000609789 160 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 MIR6076-201ENST00000617521 113 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 OR1S1-201ENST00000624470 978 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms