Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 MIR9-1-201ENST00000385198 89 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL592148.1-201ENST00000413568 445 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 RPLP0P7-201ENST00000416050 667 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL513477.1-202ENST00000417061 214 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 CCDC58P2-201ENST00000417131 366 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 USP9YP20-201ENST00000419224 558 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL953862.1-201ENST00000423016 168 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL356867.1-201ENST00000429623 299 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL714022.1-201ENST00000439897 151 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL135938.1-201ENST00000443141 297 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 ARPC3P5-201ENST00000448802 534 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC234775.1-201ENST00000454247 670 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 USP9YP25-201ENST00000457708 443 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC116337.2-201ENST00000477662 156 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL135752.1-201ENST00000479477 471 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 RPL37P25-201ENST00000507308 276 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC116353.3-201ENST00000511215 249 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 RNA5SP282-201ENST00000516355 108 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 RNU6-1282P-201ENST00000516735 96 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 MTCO2P15-201ENST00000532655 656 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 OR5BN1P-201ENST00000532955 829 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC022662.1-201ENST00000580252 331 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 MIR5194-201ENST00000582634 120 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 BNIP3P40-201ENST00000596017 556 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC080013.3-201ENST00000606839 578 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC024560.3-201ENST00000608482 349 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL357080.1-201ENST00000617394 239 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 MIR6130-201ENST00000619419 109 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AP001002.2-201ENST00000625137 386 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC116618.1-201ENST00000634617 774 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 OR5H6-203ENST00000642105 978 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL390862.1-201ENST00000635467 1469 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL022578.1-201ENST00000439330 1433 ntBASIC1.99□□□□□ -2.09
SHANK2-AS3Q9BTD1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL079343.1-201ENST00000572358 1771 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC011477.1-204ENST00000623416 1325 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 Y_RNA.465-201ENST00000384293 102 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RNU6-1122P-201ENST00000384449 107 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RNU6-1035P-201ENST00000384477 107 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 ANAPC10P1-201ENST00000395991 556 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC080125.1-201ENST00000414888 684 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 SSR1P2-201ENST00000415208 787 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 SPA17P1-201ENST00000416656 452 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MTCYBP38-201ENST00000417160 1123 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MTCO2P5-201ENST00000422621 426 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC018630.2-202ENST00000422992 927 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC009414.1-201ENST00000427200 443 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 ARPC3P1-201ENST00000437218 533 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 SDCBPP1-201ENST00000440192 890 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MTND5P14-201ENST00000441481 1267 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RPS24P13-201ENST00000442520 397 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 NANOGNBP1-201ENST00000448444 480 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC104978.1-201ENST00000449387 391 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC092155.2-201ENST00000454675 477 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 DUXAP8-207ENST00000456786 622 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC073901.1-201ENST00000462471 408 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RPS27P26-201ENST00000494583 239 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RPS27P27-201ENST00000498779 255 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 TTC39CP1-201ENST00000512513 755 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 RNA5SP367-201ENST00000516557 118 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 CKS1BP7-201ENST00000522230 235 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 COX6CP8-201ENST00000522620 226 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC009163.5-201ENST00000575421 637 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 MTCO2P2-201ENST00000591258 225 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AP001429.1-201ENST00000602568 530 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL161734.1-201ENST00000609720 557 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AC092106.3-201ENST00000611308 722 ntBASIC1.98□□□□□ -2.09
SHANK2-AS3Q9BTD1 AL356473.1-201ENST00000406203 1408 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms