Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RPL21P12-201ENST00000559810 515 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 AC005951.1-201ENST00000576706 485 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 DPPA3P3-201ENST00000603842 430 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 SNORA50A-202ENST00000629536 136 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 AC099654.12-201ENST00000639868 649 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.29□□□□□ -1.88
PCGF1Q9BSM1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNU6-188P-201ENST00000364207 107 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNA5SP97-201ENST00000365006 84 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNU6-701P-201ENST00000384059 107 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNU6-1215P-201ENST00000384441 102 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 MIR558-201ENST00000384920 94 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 MIR134-201ENST00000385258 73 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC091390.3-201ENST00000426478 338 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RPL23AP30-201ENST00000432419 501 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 GPR143P-201ENST00000434155 205 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 HMGB3P12-201ENST00000438745 556 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RN7SL432P-201ENST00000484057 298 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RPL9P6-201ENST00000492764 598 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 HMGB1P29-201ENST00000505659 499 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RN7SKP258-201ENST00000517151 304 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RNA5SP179-201ENST00000517284 121 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AP006587.4-201ENST00000526053 529 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AP003033.1-201ENST00000527244 415 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC091516.1-201ENST00000549191 703 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RN7SL703P-201ENST00000578485 302 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC080078.2-201ENST00000603766 501 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC091167.4-201ENST00000605079 184 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AL021997.1-201ENST00000605757 193 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AL591424.2-201ENST00000617023 128 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 FRG1KP-201ENST00000623592 341 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 AC008568.2-201ENST00000623862 2313 ntBASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCGF1Q9BSM1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.28□□□□□ -1.89
PCGF1Q9BSM1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RNU6-108P-201ENST00000365558 107 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 SMIM11P1-201ENST00000369586 178 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 MIR591-201ENST00000385290 95 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 SNORA11-201ENST00000408789 128 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AL513331.1-201ENST00000411908 397 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 MED13P1-201ENST00000428342 171 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 SNORA71B-202ENST00000439232 272 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 MTND1P1-201ENST00000445453 368 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RPL31P61-201ENST00000496160 376 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 BTF3L4P4-201ENST00000506381 449 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 FAM92A1P1-201ENST00000528023 890 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AC016957.1-201ENST00000534895 309 ntBASIC3.27□□□□□ -1.89
PCGF1Q9BSM1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms