Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC105254.2-201ENST00000603636 436 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC126915.2-201ENST00000610957 190 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC015914.2-201ENST00000618167 288 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL138825.1-201ENST00000618587 192 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL356489.2-201ENST00000566968 3528 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL365440.1-201ENST00000436135 2167 ntBASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM56Q9BRZ2 AL672167.1-203ENST00000641299 2975 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 MAPK10-320ENST00000641462 6696 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC091812.1-201ENST00000432235 1948 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-874P-201ENST00000362390 105 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RNA5SP443-201ENST00000363083 132 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP224-201ENST00000364140 325 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RHOT1P2-201ENST00000366423 333 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-76P-201ENST00000384060 104 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 MIR585-201ENST00000384887 94 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP216-201ENST00000411050 312 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC119751.6-201ENST00000416712 186 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC112492.4-201ENST00000456549 352 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC084198.1-201ENST00000477747 402 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RPL7AP6-201ENST00000477943 801 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AP000926.1-201ENST00000479573 241 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-840P-201ENST00000517275 65 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 BNIP3P5-201ENST00000562290 498 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC007619.2-201ENST00000605743 379 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AL021879.1-201ENST00000611756 288 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AL591926.8-201ENST00000616876 211 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC009643.2-201ENST00000603543 1448 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC107068.1-201ENST00000563286 4218 ntBASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM56Q9BRZ2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 SDAD1P2-201ENST00000441308 2028 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 SNORA17.1-201ENST00000362945 126 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RN7SKP113-201ENST00000363891 295 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-450P-201ENST00000364654 107 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 Y_RNA.480-201ENST00000384364 102 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RNU6-713P-201ENST00000384761 107 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 SSXP9-201ENST00000417503 292 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC243428.1-201ENST00000421099 264 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RPSAP50-201ENST00000481955 852 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC068781.1-201ENST00000488231 618 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RN7SL808P-201ENST00000496066 299 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RNU4-77P-201ENST00000516692 156 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 RPL23AP53-201ENST00000521854 457 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 ERHP1-201ENST00000523006 310 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AL121603.1-201ENST00000553815 142 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 HSBP1P1-201ENST00000555205 166 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 Z98751.3-201ENST00000604447 521 ntBASIC5.03□□□□□ -1.6
TRIM56Q9BRZ2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms