Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CDX2Q99626 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX2Q99626 RPL7P27-201ENST00000403775 720 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX2Q99626 RNA5SP492-201ENST00000411330 114 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 MTCO3P12-201ENST00000416718 547 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 RPL7P30-201ENST00000420888 709 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 MTCO3P1-205ENST00000422088 832 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 UBE2D3P2-201ENST00000424409 445 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC079780.1-201ENST00000428259 207 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 GTF2IP7-202ENST00000436677 309 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 NDUFB4P6-201ENST00000436819 366 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC079776.3-201ENST00000450665 370 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 USP9YP34-201ENST00000453983 808 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 snoU13.4-201ENST00000458916 104 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 RPS29P12-201ENST00000460178 152 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC104629.1-201ENST00000494226 508 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX2Q99626 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 RNU6-1028P-201ENST00000517164 93 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 MTCYBP20-201ENST00000524239 1129 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 DEFB130C-202ENST00000530001 230 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC087894.1-201ENST00000538359 518 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC090502.2-201ENST00000549267 280 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX2Q99626 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.44□□□□□ -2.02
CDX2Q99626 AC009220.3-201ENST00000604318 586 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC010738.1-201ENST00000604970 987 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AL583856.2-201ENST00000606298 543 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AP000240.1-201ENST00000609910 452 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.44□□□□□ -2.02
CDX2Q99626 AL391262.2-201ENST00000622466 494 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 MKKS-204ENST00000639674 192 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDX2Q99626 Z99496.1-201ENST00000469424 1477 ntBASIC2.44□□□□□ -2.02
CDX2Q99626 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.44□□□□□ -2.02
CDX2Q99626 AL355596.1-201ENST00000565399 3996 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.43□□□□□ -2.02
CDX2Q99626 AC027514.1-201ENST00000588561 1603 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDX2Q99626 RNU6-492P-201ENST00000363035 104 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 RNU6-799P-201ENST00000363567 107 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 SNORA11.4-201ENST00000408823 129 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX2Q99626 USP9YP6-201ENST00000413550 854 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 BTF3P8-201ENST00000414577 526 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 BTF3P4-201ENST00000418852 495 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 MTND2P9-201ENST00000422293 931 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX2Q99626 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 MTCYBP42-201ENST00000444653 1130 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDX2Q99626 RPL21P131-201ENST00000497298 483 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC098799.2-201ENST00000509466 868 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 RNU6-1095P-201ENST00000516148 108 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.43□□□□□ -2.02
CDX2Q99626 NDUFS5P6-201ENST00000529136 295 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX2Q99626 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 AC245036.5-201ENST00000596330 847 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC068620.3-201ENST00000602749 560 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC012119.1-201ENST00000603184 222 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC024060.1-201ENST00000607052 494 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC144521.1-201ENST00000607148 956 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.43□□□□□ -2.02
CDX2Q99626 AL355810.1-201ENST00000614629 552 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC023158.2-201ENST00000614876 543 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC073348.1-201ENST00000623002 331 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC109454.4-201ENST00000623411 649 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 CR381653.2-201ENST00000624041 768 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC126544.2-201ENST00000625174 749 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 CYP3A51P-201ENST00000633513 256 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.43□□□□□ -2.02
CDX2Q99626 CUL1P1-201ENST00000509510 2425 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 AP005901.5-201ENST00000545779 1796 ntBASIC2.43□□□□□ -2.02
CDX2Q99626 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CDX2Q99626 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX2Q99626 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDX2Q99626 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CDX2Q99626 SNORD56.5-201ENST00000364281 72 ntBASIC2.42□□□□□ -2.02
CDX2Q99626 RNU6-1300P-201ENST00000391046 108 ntBASIC2.42□□□□□ -2.02
CDX2Q99626 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CDX2Q99626 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.42□□□□□ -2.02
CDX2Q99626 AC013828.1-201ENST00000481845 158 ntBASIC2.42□□□□□ -2.02
CDX2Q99626 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
CDX2Q99626 AC004062.1-201ENST00000509926 645 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms