Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 AP002812.1-201ENST00000495378 474 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 MTCO1P29-201ENST00000496868 288 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.32□□□□□ -1.4
ARXQ96QS3 AP005597.4-201ENST00000526762 229 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.32□□□□□ -1.4
ARXQ96QS3 MIR6076-201ENST00000617521 113 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 uc_338.11-201ENST00000619132 160 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.32□□□□□ -1.4
ARXQ96QS3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ARXQ96QS3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ARXQ96QS3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ARXQ96QS3 AL136164.4-201ENST00000625013 2135 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.32□□□□□ -1.4
ARXQ96QS3 AC004972.1-201ENST00000623934 2209 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ARXQ96QS3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ARXQ96QS3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC087190.4-201ENST00000574616 8334 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.31□□□□□ -1.4
ARXQ96QS3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AP004289.2-201ENST00000444413 1457 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 Y_RNA.128-201ENST00000363391 112 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RNA5SP509-201ENST00000364577 119 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RNU4-66P-201ENST00000365199 138 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.31□□□□□ -1.4
ARXQ96QS3 MIR514A2-201ENST00000385131 88 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 MIR514A3-201ENST00000385132 88 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 OR6C66P-201ENST00000414917 930 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RPL34P6-201ENST00000432390 345 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AL591438.1-201ENST00000433508 581 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AC092573.2-201ENST00000434546 243 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AC020550.1-201ENST00000447385 163 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RPL23AP56-201ENST00000460778 453 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RPL23AP11-201ENST00000475260 469 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AP000889.1-201ENST00000530968 660 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.31□□□□□ -1.4
ARXQ96QS3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC026464.5-201ENST00000562497 722 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AC093249.1-201ENST00000567049 203 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AC008638.3-201ENST00000603341 463 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC004696.1-201ENST00000614345 607 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.31□□□□□ -1.4
ARXQ96QS3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ARXQ96QS3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
ARXQ96QS3 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.31□□□□□ -1.4
ARXQ96QS3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ARXQ96QS3 MTND4P14-201ENST00000435799 1354 ntBASIC6.31□□□□□ -1.4
ARXQ96QS3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ARXQ96QS3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ARXQ96QS3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ARXQ96QS3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ARXQ96QS3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ARXQ96QS3 RNU6-741P-201ENST00000383889 107 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 RNU6-641P-201ENST00000384006 107 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 MIR670-201ENST00000390142 98 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 RPS4XP3-201ENST00000398541 413 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 NDUFS5P1-201ENST00000405668 289 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 MIR548P-201ENST00000408336 84 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 RNU2-29P-201ENST00000410423 189 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 Y_RNA.615-201ENST00000410769 117 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 RNU6-1148P-201ENST00000410992 104 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.3□□□□□ -1.4
ARXQ96QS3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 MIR2116-201ENST00000517221 80 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.3□□□□□ -1.4
ARXQ96QS3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.3□□□□□ -1.4
ARXQ96QS3 AC068831.7-201ENST00000616954 363 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 MIR6839-201ENST00000620425 113 ntBASIC6.3□□□□□ -1.4
ARXQ96QS3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC6.3□□□□□ -1.4
ARXQ96QS3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.3□□□□□ -1.4
ARXQ96QS3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ARXQ96QS3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ARXQ96QS3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
ARXQ96QS3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ARXQ96QS3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ARXQ96QS3 Y_RNA.259-201ENST00000364619 101 ntBASIC6.29□□□□□ -1.4
ARXQ96QS3 SNORA70C-201ENST00000384538 135 ntBASIC6.29□□□□□ -1.4
ARXQ96QS3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ARXQ96QS3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.29□□□□□ -1.4
ARXQ96QS3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.29□□□□□ -1.4
ARXQ96QS3 AL590639.1-201ENST00000456484 337 ntBASIC6.29□□□□□ -1.4
ARXQ96QS3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.29□□□□□ -1.4
ARXQ96QS3 AC116562.3-201ENST00000506136 177 ntBASIC6.29□□□□□ -1.4
ARXQ96QS3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms