Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.52□□□□□ -1.53
CALR3Q96L12 MIR1273E-201ENST00000581165 102 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.52□□□□□ -1.53
CALR3Q96L12 PRR13P7-201ENST00000605538 430 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 RNU6-6P-201ENST00000606623 107 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.52□□□□□ -1.53
CALR3Q96L12 AC000068.2-201ENST00000608816 460 ntBASIC5.52□□□□□ -1.53
CALR3Q96L12 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.52□□□□□ -1.53
CALR3Q96L12 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CALR3Q96L12 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.52□□□□□ -1.53
CALR3Q96L12 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CALR3Q96L12 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.52□□□□□ -1.53
CALR3Q96L12 AC018529.3-201ENST00000624212 2254 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.51□□□□□ -1.53
CALR3Q96L12 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.51□□□□□ -1.53
CALR3Q96L12 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CALR3Q96L12 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CALR3Q96L12 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 AC091812.1-201ENST00000432235 1948 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 MIR133B-201ENST00000362210 119 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 Y_RNA.153-201ENST00000363615 91 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 SNORD14B-201ENST00000364533 90 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AL133270.1-201ENST00000402635 279 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 RNU6-101P-201ENST00000410323 104 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 Y_RNA.623-201ENST00000411128 95 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 DPH3P2-201ENST00000422618 250 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
CALR3Q96L12 TOMM20P4-201ENST00000427861 435 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AC006946.1-201ENST00000429106 328 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.51□□□□□ -1.53
CALR3Q96L12 AL627311.1-201ENST00000431514 115 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 RPS15AP10-201ENST00000432472 382 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AL731563.1-201ENST00000442202 214 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AL031274.1-201ENST00000450334 232 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AL583843.1-201ENST00000456070 346 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AC022447.4-201ENST00000504053 364 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 RNA5SP473-201ENST00000516402 125 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AC012400.1-201ENST00000518452 381 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 BNIP3P1-201ENST00000547295 580 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 AL161670.1-201ENST00000554348 137 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.51□□□□□ -1.53
CALR3Q96L12 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.51□□□□□ -1.53
CALR3Q96L12 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.51□□□□□ -1.53
CALR3Q96L12 AC015914.2-201ENST00000618167 288 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 FP236240.3-201ENST00000623061 327 ntBASIC5.51□□□□□ -1.53
CALR3Q96L12 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.51□□□□□ -1.53
CALR3Q96L12 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CALR3Q96L12 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CALR3Q96L12 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CALR3Q96L12 NOL8P1-201ENST00000508336 3529 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC126323.6-202ENST00000568092 3511 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AL672167.1-204ENST00000641875 3017 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC008568.2-201ENST00000623862 2313 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 Y_RNA.193-201ENST00000363979 102 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 Y_RNA.314-201ENST00000365114 102 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 Y_RNA.577-201ENST00000384794 101 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AL139148.1-201ENST00000427122 680 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC068287.1-201ENST00000430283 295 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 PIGFP3-201ENST00000441918 722 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 CECR9-201ENST00000453421 199 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC005532.2-201ENST00000467154 373 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC022795.1-201ENST00000473808 480 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 KC877373.1-201ENST00000479066 408 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 RN7SL649P-201ENST00000496974 275 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AC025755.1-201ENST00000521306 278 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 RPL23AP53-201ENST00000521854 457 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CALR3Q96L12 NDUFB4P11-201ENST00000560510 395 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 RN7SL435P-201ENST00000584418 282 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.5□□□□□ -1.53
CALR3Q96L12 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.5□□□□□ -1.53
CALR3Q96L12 AL645944.1-201ENST00000603857 493 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 SNORD58B-201ENST00000607313 66 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 AL359693.1-201ENST00000614959 2407 ntBASIC5.5□□□□□ -1.53
CALR3Q96L12 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CALR3Q96L12 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 AL450345.1-202ENST00000605741 3881 ntBASIC5.49□□□□□ -1.53
CALR3Q96L12 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.49□□□□□ -1.53
CALR3Q96L12 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CALR3Q96L12 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms