Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 Y_RNA.463-201ENST00000384271 102 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 MIR10A-201ENST00000385043 110 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 RN7SKP125-201ENST00000410481 302 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 CRYBB2P1-203ENST00000415709 538 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 SYF2P2-201ENST00000417620 583 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 AC099670.2-201ENST00000435130 321 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 SNRPEP9-201ENST00000436794 238 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 RPL30P5-201ENST00000494923 336 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 RNA5SP384-201ENST00000516615 116 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 RNU6-572P-201ENST00000516724 80 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 AL645944.1-201ENST00000603857 493 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 AC099506.2-201ENST00000623074 221 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 MTND5P30-201ENST00000452896 1731 ntBASIC5.48□□□□□ -1.53
CCDC97Q96F63 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC97Q96F63 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC97Q96F63 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 Y_RNA.148-201ENST00000363557 117 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 DEFB109C-201ENST00000382575 264 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 DEFB109B-201ENST00000382656 264 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 RNU6-790P-201ENST00000384479 105 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 RNU6-331P-201ENST00000384724 107 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AL009179.1-201ENST00000406085 265 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 RNA5SP239-201ENST00000410218 129 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 RN7SKP216-201ENST00000411050 312 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC018865.2-201ENST00000423631 129 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 ATP5HP2-201ENST00000433885 485 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC113155.1-201ENST00000511141 769 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 RNU2-58P-201ENST00000516403 183 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC109446.1-201ENST00000566172 220 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC012616.1-201ENST00000600294 197 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AP000787.2-201ENST00000604432 568 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AP001836.1-201ENST00000604675 523 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AL121917.1-203ENST00000605534 577 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AC083806.3-201ENST00000614016 455 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 Z69720.2-201ENST00000624755 279 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 AL732372.2-225ENST00000642124 456 ntBASIC5.47□□□□□ -1.53
CCDC97Q96F63 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CCDC97Q96F63 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC97Q96F63 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC97Q96F63 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC97Q96F63 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC97Q96F63 SCARNA15-201ENST00000607520 4325 ntBASIC5.46□□□□□ -1.53
CCDC97Q96F63 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RNU6-842P-201ENST00000384269 107 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RNU6-166P-201ENST00000384371 107 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 MIR585-201ENST00000384887 94 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RNU6-1106P-201ENST00000390845 107 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RNU6-325P-201ENST00000411132 105 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 AL133396.1-201ENST00000432048 687 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 AL512844.2-201ENST00000433990 593 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 AL356535.1-201ENST00000440335 398 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 DAP3P1-201ENST00000441522 278 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 AL078601.1-201ENST00000444542 271 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RPL21P23-201ENST00000446654 460 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 FTH1P25-201ENST00000447665 469 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 AL031274.1-201ENST00000450334 232 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RPL21P104-201ENST00000464143 478 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RPS21P4-201ENST00000487122 248 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 RNU6-470P-201ENST00000515954 104 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 TRAV32-201ENST00000553993 340 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 HMGB1P14-201ENST00000557424 591 ntBASIC5.46□□□□□ -1.54
CCDC97Q96F63 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC97Q96F63 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms