Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU6-1029P-201ENST00000384109 107 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU6-767P-201ENST00000384132 107 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 MIR1251-201ENST00000408552 70 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RN7SKP263-201ENST00000411194 309 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU6-387P-201ENST00000411331 105 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC114491.1-201ENST00000416095 246 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RPL36AP53-201ENST00000432891 316 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC093019.1-201ENST00000443135 252 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RPL39P36-201ENST00000490784 156 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 MLLT10P2-201ENST00000506434 249 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU4-29P-201ENST00000515943 174 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RN7SKP219-201ENST00000516825 296 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU6-840P-201ENST00000517275 65 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 SUB1P1-201ENST00000524415 382 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 OR5B10P-201ENST00000532869 642 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 YPEL5P3-201ENST00000547227 352 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC006116.10-201ENST00000591836 581 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AL139395.1-201ENST00000603662 160 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 RNU4-89P-201ENST00000607443 133 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AL359314.1-201ENST00000616913 261 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC112484.5-201ENST00000624189 228 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 AC100810.6-201ENST00000638068 285 ntBASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CTHRC1Q96CG8 TAB3P1-202ENST00000452645 1634 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 ASNSP3-201ENST00000451989 1306 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC027290.2-201ENST00000623210 18662 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 SPRR2C-201ENST00000290702 219 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RNU6-173P-201ENST00000364215 104 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RNU6-335P-201ENST00000364563 113 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RNU6-76P-201ENST00000384060 104 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RNU6-332P-201ENST00000391193 108 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 SNORA57.1-201ENST00000391227 145 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 PPIAP31-201ENST00000405422 495 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RNA5SP306-201ENST00000411087 107 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 OR6C66P-201ENST00000414917 930 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RPL7P28-201ENST00000437739 740 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL353748.1-201ENST00000440753 474 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 MTND4LP16-201ENST00000440828 295 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 ELOCP23-201ENST00000452014 332 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL132838.2-201ENST00000492041 314 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC106872.2-201ENST00000494303 480 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 MTCO2P30-201ENST00000503662 364 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC091885.1-201ENST00000506658 268 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 KLHL2P1-201ENST00000508691 521 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC004062.1-201ENST00000509926 645 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 GMPSP1-201ENST00000514075 579 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC103843.2-201ENST00000530523 682 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC007424.1-203ENST00000554613 687 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC008638.3-201ENST00000603341 463 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC015967.1-201ENST00000619893 476 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL589994.2-201ENST00000621124 579 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AC007998.5-201ENST00000622938 237 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 RLIMP1-201ENST00000339626 1680 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 API5P2-201ENST00000397055 1498 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 ZNF962P-201ENST00000443465 3140 ntBASIC3.73□□□□□ -1.81
CTHRC1Q96CG8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CTHRC1Q96CG8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms