Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AL162395.1-201ENST00000457882 422 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC015724.1-201ENST00000478577 156 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC233702.1-201ENST00000482905 502 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 HMGB1P30-201ENST00000492455 606 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 EIF4EP3-201ENST00000498782 656 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 RPL38P4-201ENST00000502376 214 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 UBE2CP3-201ENST00000502715 450 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-559P-201ENST00000516151 98 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC078899.5-201ENST00000612475 178 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AC079597.1-201ENST00000624306 508 ntBASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF3Q8TEJ3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF962P-201ENST00000443465 3140 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL161912.2-201ENST00000565707 3007 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNU1-108P-201ENST00000362556 161 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNU4-1-201ENST00000363925 141 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-1222P-201ENST00000384615 107 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 MIR513A2-201ENST00000385249 127 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-1106P-201ENST00000390845 107 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNY4P36-201ENST00000391116 96 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL121972.1-201ENST00000402023 252 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL121834.1-202ENST00000404494 277 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC073264.1-201ENST00000411508 416 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC093578.1-201ENST00000415219 368 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 EIF4EP1-201ENST00000422311 642 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 UBE2V1P5-201ENST00000440070 405 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL137792.2-201ENST00000443484 235 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 TTC39CP1-201ENST00000512513 755 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC026403.1-201ENST00000518938 295 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC024220.1-201ENST00000603675 484 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC113194.1-201ENST00000606037 500 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 SNORA51-201ENST00000606420 132 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AP001521.1-201ENST00000609150 300 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 HMGB1P24-202ENST00000615653 685 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 U4.1-201ENST00000620349 87 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL359757.2-201ENST00000624309 274 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AL034408.1-202ENST00000636088 415 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 OR4G1P-203ENST00000641984 1631 ntBASIC4.57□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AL136964.1-201ENST00000622038 2990 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 NACAP2-201ENST00000318548 624 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 RNU5E-1-201ENST00000362477 120 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 RNA5SP391-201ENST00000363456 119 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 RNU4-70P-201ENST00000384579 139 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 MIR449B-201ENST00000384995 97 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 RPL7P60-201ENST00000397636 735 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 Y_RNA.618-201ENST00000410949 107 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 DUTP6-201ENST00000425573 462 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC008065.1-201ENST00000428525 348 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 BNIP3P2-201ENST00000441221 577 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 PPP1R2P5-201ENST00000457256 603 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC022034.3-201ENST00000471393 478 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC012181.1-201ENST00000479895 423 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 SNRPGP18-201ENST00000553000 214 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC010653.1-201ENST00000571108 881 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms