Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC037471.2-201ENST00000564941 598 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC090186.1-201ENST00000605991 572 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC080013.6-201ENST00000606185 215 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 SNORA4.1-201ENST00000364263 144 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 RNU6-744P-201ENST00000365557 107 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 SNORA36C-201ENST00000384289 132 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 RNU6-516P-201ENST00000411381 104 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 SPA17P1-201ENST00000416656 452 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 LSM1P1-201ENST00000438629 273 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 BZW1P2-201ENST00000473537 826 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AP001025.2-201ENST00000490908 477 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC005178.1-201ENST00000508392 440 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC008885.1-201ENST00000514930 301 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 PIGPP4-201ENST00000584447 307 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC006539.2-201ENST00000601729 572 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AP000811.1-201ENST00000603803 651 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC013553.2-201ENST00000604244 589 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTL3Q8N8U3 AC092447.10-201ENST00000620607 1652 ntBASIC3.14□□□□□ -1.91
RTL3Q8N8U3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 DDX10P1-201ENST00000448545 1933 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RNU6-500P-201ENST00000362349 107 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 SNORD116-1-201ENST00000384335 95 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RNU6-114P-201ENST00000384704 105 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 MIR325-201ENST00000385260 98 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RN7SKP220-201ENST00000410611 288 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 ATG3P1-201ENST00000419507 911 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL365338.1-201ENST00000422282 858 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 OR2AS1P-201ENST00000427827 319 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL035407.1-201ENST00000429211 571 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 FTH1P1-201ENST00000437933 532 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC093281.2-201ENST00000510153 597 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RNA5SP216-201ENST00000516111 123 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 RNU6-759P-201ENST00000516740 103 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AP003497.1-201ENST00000528472 562 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL845331.3-202ENST00000562856 261 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC034268.2-201ENST00000571784 482 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC010620.1-201ENST00000601088 1102 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC024560.3-201ENST00000608482 349 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC122133.1-201ENST00000613964 233 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms