Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 IGLV2-34-201ENST00000490007 283 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC231760.1-201ENST00000498002 260 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC008958.1-201ENST00000511047 682 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 ENPP7P9-201ENST00000514456 627 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 EIF4A2P5-201ENST00000529914 499 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AMZ2P1-203ENST00000565833 850 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 MIR4646-201ENST00000580775 63 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC012119.1-201ENST00000603184 222 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC074140.1-201ENST00000621617 208 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AP001784.1-201ENST00000624107 428 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 Z95331.1-201ENST00000623075 23112 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AL731532.2-201ENST00000623542 1953 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 RNU6-1290P-201ENST00000362957 109 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 RNU6-701P-201ENST00000384059 107 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 SNORA51.8-201ENST00000384234 132 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 SNORD73A-201ENST00000386062 65 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 CTSL3P-202ENST00000412179 788 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC092809.3-201ENST00000415453 231 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC092423.1-201ENST00000430165 186 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 RN7SL517P-201ENST00000462240 305 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 RPS27AP1-201ENST00000475545 471 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC008716.1-201ENST00000511084 513 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 Y_RNA.689-201ENST00000516589 107 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 RNU6-347P-201ENST00000516658 105 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 Y_RNA.713-201ENST00000517013 96 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC005868.1-201ENST00000536421 331 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC004584.2-201ENST00000570407 410 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 MIR4691-201ENST00000583764 85 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 AC104260.2-201ENST00000623551 3497 ntBASIC4.51□□□□□ -1.69
ATG4DQ86TL0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
ATG4DQ86TL0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC090740.1-201ENST00000623193 2262 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 MIR411-201ENST00000362239 96 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RNU6-596P-201ENST00000365395 98 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 U3.42-201ENST00000408746 214 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC006946.1-201ENST00000429106 328 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RPL35AP22-201ENST00000436855 335 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL591623.2-201ENST00000449978 222 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 PPIAP3-201ENST00000450588 505 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RNU7-138P-201ENST00000459479 64 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RN7SL244P-201ENST00000493405 297 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SERF1AP1-201ENST00000514575 187 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 RNU6-1338P-201ENST00000516328 91 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 SCARNA24.2-201ENST00000516968 130 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 MIR4700-201ENST00000578311 74 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL670379.6-201ENST00000603753 252 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AC025588.3-201ENST00000604182 274 ntBASIC4.5□□□□□ -1.69
ATG4DQ86TL0 AL670379.1-201ENST00000604752 252 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms