Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC234781.5-201ENST00000508429 271 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 XKRY-201ENST00000510392 1100 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC104986.1-201ENST00000517978 436 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 OR5AK1P-201ENST00000524837 922 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 HIGD1AP10-201ENST00000527837 282 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 ZNF321P-202ENST00000550843 495 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 MTND3P12-201ENST00000559068 328 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 MAGOH2P-202ENST00000584384 429 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AL139344.1-201ENST00000605228 195 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC243773.3-201ENST00000613270 256 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 XIST_intron.1-201ENST00000619444 68 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC017037.3-201ENST00000625016 472 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 PISRT1-201ENST00000626175 531 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AP002907.1-201ENST00000606361 1430 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 AC005539.1-201ENST00000443768 1479 ntBASIC3.48□□□□□ -1.85
NPHP3Q7Z494 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RPL21P132-201ENST00000331267 462 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RNU1-73P-201ENST00000383971 164 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 SNORD51-201ENST00000384320 80 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL359511.1-201ENST00000402970 211 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL451074.5-201ENST00000415894 435 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 PSMA6P3-201ENST00000428242 164 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RPS29P6-201ENST00000438196 145 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC011816.1-201ENST00000441346 546 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 MTND1P31-201ENST00000449206 961 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RPS15AP17-201ENST00000470598 390 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 TMEM251P1-201ENST00000503717 318 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC010625.1-201ENST00000511296 403 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 SNORA9.3-201ENST00000516383 129 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RNU6-548P-201ENST00000517083 115 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 SNRPGP16-201ENST00000533275 226 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC009712.1-201ENST00000564938 316 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 BNIP3P24-201ENST00000593398 557 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL353778.1-201ENST00000603149 408 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AL031281.1-201ENST00000604049 488 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC006270.3-201ENST00000605967 1036 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 ZNF72P-201ENST00000425869 1908 ntBASIC3.47□□□□□ -1.85
NPHP3Q7Z494 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.47□□□□□ -1.85
NPHP3Q7Z494 RNU6-878P-201ENST00000384578 110 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 MIR1284-201ENST00000408337 120 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 ANKRD26P4-201ENST00000455755 950 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC068587.2-201ENST00000478386 781 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 RPL21P99-201ENST00000480369 423 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 HSPE1P23-201ENST00000509838 286 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 RNU1-61P-201ENST00000516107 151 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC018630.1-201ENST00000541376 925 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC009094.1-201ENST00000564443 426 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 MIR4506-201ENST00000584693 77 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AL020991.1-201ENST00000612314 373 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AL355810.1-201ENST00000614629 552 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 AC099063.3-201ENST00000642066 185 ntBASIC3.46□□□□□ -1.85
NPHP3Q7Z494 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NPHP3Q7Z494 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPHP3Q7Z494 SNORD114-1-201ENST00000362705 72 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 DYNLT3P1-201ENST00000378574 347 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 DHFRP6-201ENST00000401776 268 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 AC007064.1-201ENST00000412238 351 ntBASIC3.45□□□□□ -1.86
NPHP3Q7Z494 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms