Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL670379.7-201ENST00000605823 252 ntBASIC4.13□□□□□ -1.75
CCDC149Q6ZUS6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC149Q6ZUS6 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC149Q6ZUS6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC149Q6ZUS6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 Y_RNA.1-201ENST00000352915 104 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 Y_RNA.22-201ENST00000362492 102 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 SNORD74.4-201ENST00000364129 80 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MIR514A1-201ENST00000385133 98 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MTCO3P40-201ENST00000392516 676 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 FCF1P9-201ENST00000412546 282 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RAC1P6-201ENST00000423911 575 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AL591419.1-201ENST00000427423 339 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MTCO2P19-201ENST00000427513 598 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RPL7L1P10-201ENST00000427790 463 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC020550.1-201ENST00000447385 163 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 PRDX3P3-201ENST00000447765 522 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RN7SL585P-201ENST00000470538 280 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RPS3AP14-201ENST00000483907 780 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RN7SL432P-201ENST00000484057 298 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 UBE2CP3-201ENST00000502715 450 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RNA5SP164-201ENST00000516533 110 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 RNU6-1092P-201ENST00000516955 87 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MTND1P5-201ENST00000517906 940 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 HMGB1P41-201ENST00000520234 440 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 TPRKBP2-201ENST00000565969 475 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC098848.2-201ENST00000588023 330 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AL391646.1-201ENST00000603860 190 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AL031666.3-201ENST00000609320 1006 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 U4.5-201ENST00000617137 123 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AL359880.1-201ENST00000621879 266 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 AC009161.2-201ENST00000624626 138 ntBASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC149Q6ZUS6 MAPK10-372ENST00000641954 3413 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AL137003.2-201ENST00000606924 2538 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC073343.1-201ENST00000328239 651 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 RNU6-960P-201ENST00000364056 120 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 DEFB109C-201ENST00000382575 264 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 DEFB109B-201ENST00000382656 264 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 U1.1-201ENST00000384101 164 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MIR181A1-201ENST00000385026 110 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 SYF2P2-201ENST00000417620 583 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 TIMM9P3-201ENST00000428659 274 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 RPL23AP30-201ENST00000432419 501 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 HMGB3P12-201ENST00000438745 556 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 RPS20P20-201ENST00000460498 340 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 RPS4XP13-201ENST00000483219 789 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AL049874.1-201ENST00000489560 388 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC079382.1-201ENST00000493346 557 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC087369.1-201ENST00000520775 996 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AP001893.2-201ENST00000526949 202 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 RPS3AP4-201ENST00000555161 764 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC055876.1-202ENST00000567053 138 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 AC012531.5-201ENST00000611375 151 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 MIR4727-201ENST00000622232 55 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 CR381653.2-201ENST00000624041 768 ntBASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC149Q6ZUS6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms