Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC010975.2-201ENST00000427781 588 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 GAPDHP17-201ENST00000449858 1001 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 MTCYBP1-201ENST00000454315 1119 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 KLF3P2-201ENST00000465138 268 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 MIR3118-1-201ENST00000581787 76 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC068790.3-201ENST00000602988 553 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC004908.2-201ENST00000609090 574 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC099778.2-201ENST00000610904 211 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 Z99129.1-201ENST00000612510 255 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 uc_338.12-201ENST00000616344 181 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 MIR6075-201ENST00000620782 95 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AL360181.4-201ENST00000621752 134 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC091953.2-201ENST00000623979 160 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 PISRT1-201ENST00000626175 531 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC010149.2-201ENST00000637608 315 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 AC118273.1-201ENST00000525324 3006 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 TAB3P1-202ENST00000452645 1634 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-637P-201ENST00000384050 107 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 CCNG1P1-201ENST00000406783 885 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 RNU2-66P-201ENST00000410650 161 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 DUTP6-201ENST00000425573 462 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AL159987.2-201ENST00000432754 307 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 RPL35AP22-201ENST00000436855 335 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 DNAJC19P4-201ENST00000440115 345 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC010285.1-201ENST00000470580 392 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 RNU2-46P-201ENST00000517038 113 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC107934.1-201ENST00000522215 217 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AP003181.2-201ENST00000528941 181 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AL133153.1-201ENST00000557756 303 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 EIF1P4-201ENST00000572664 335 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 MIR3146-201ENST00000580367 79 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 MIR3682-201ENST00000581338 84 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC006566.1-201ENST00000608943 513 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC093838.1-201ENST00000613014 469 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AC008250.2-201ENST00000615261 205 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 MIR7153-201ENST00000637758 57 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 AP001350.1-201ENST00000601906 1524 ntBASIC3.89□□□□□ -1.79
SYNE3Q6ZMZ3 GNG5P1-201ENST00000255500 204 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 RNU1-33P-201ENST00000364249 162 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL136372.1-201ENST00000403060 228 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 RPS3AP24-201ENST00000407896 734 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MTCO1P39-201ENST00000426148 480 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL589872.1-201ENST00000426602 288 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC097713.2-201ENST00000430199 356 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 OR4K11P-201ENST00000431829 904 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC090774.1-201ENST00000435925 246 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 TIMM9P1-201ENST00000436122 256 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 MTCO2P29-201ENST00000465212 189 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC138853.1-201ENST00000503549 823 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 CDC42P4-201ENST00000510507 563 ntBASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.88□□□□□ -1.79
SYNE3Q6ZMZ3 AC091133.4-201ENST00000511142 308 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms