Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU5F-7P-201ENST00000363696 115 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-1284P-201ENST00000363701 100 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MIR490-201ENST00000384865 128 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC092047.1-201ENST00000424997 240 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AL445669.1-201ENST00000426743 755 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 HMGB1P27-201ENST00000431429 603 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 LARP1BP3-201ENST00000437229 869 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 RPL23AP22-201ENST00000437556 453 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AL049734.2-201ENST00000441066 616 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 PDSS1P2-201ENST00000449397 678 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 CENPBD1P1-201ENST00000464061 469 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC068724.1-201ENST00000487100 792 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC123904.3-201ENST00000547218 814 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MTCO3P24-201ENST00000572729 782 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3□□□□□ -1.93
NHLRC1Q6VVB1 VN1R90P-201ENST00000595717 726 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 KC877982.1-201ENST00000602313 470 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC146944.4-201ENST00000602697 718 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AL359999.1-201ENST00000604513 294 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC121334.2-201ENST00000605387 271 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 AC068880.5-201ENST00000624331 290 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3□□□□□ -1.93
NHLRC1Q6VVB1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 SNORA71.3-201ENST00000362582 128 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RNA5SP119-201ENST00000362715 117 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RNA5SP197-201ENST00000363357 119 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RNU1-39P-201ENST00000383897 165 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 MIR218-2-201ENST00000385006 110 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 ELOCP17-201ENST00000414751 326 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC093578.1-201ENST00000415219 368 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC245291.1-201ENST00000419501 328 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 HMGN2P31-201ENST00000432430 273 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RPL7P34-201ENST00000433316 712 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 OR6C5P-201ENST00000452388 923 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RPS29P12-201ENST00000460178 152 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC008155.2-201ENST00000464337 397 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC112204.1-201ENST00000502591 103 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-927P-201ENST00000516199 100 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-1003P-201ENST00000517099 105 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 DUXAP2-201ENST00000519198 589 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 MTND4LP18-201ENST00000526864 291 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC007115.1-201ENST00000546853 234 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC090616.2-202ENST00000584248 222 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC006557.5-201ENST00000603126 811 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 ELOCP35-201ENST00000604289 336 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC084782.3-201ENST00000612282 578 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AL356321.1-201ENST00000621360 228 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC007671.2-201ENST00000637344 619 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 MTND5P27-201ENST00000428871 1720 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC007496.3-201ENST00000624987 3443 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 AC010680.1-201ENST00000590024 3590 ntBASIC2.99□□□□□ -1.93
NHLRC1Q6VVB1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 RNU6-660P-201ENST00000364566 109 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 RPS29P4-201ENST00000414733 161 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AL356968.1-201ENST00000416622 474 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AC244035.1-201ENST00000430042 390 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 BNIP3P2-201ENST00000441221 577 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 MTND2P22-201ENST00000444325 1033 ntBASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.98□□□□□ -1.93
NHLRC1Q6VVB1 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms