Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HMGB1P21-201ENST00000502313 581 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 RNA5SP401-201ENST00000515920 127 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 RNA5SP337-201ENST00000517007 109 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AP006245.1-201ENST00000522549 120 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC093027.1-201ENST00000546698 429 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC125611.2-201ENST00000551907 647 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AL161713.1-201ENST00000555538 145 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC011712.1-201ENST00000588959 234 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC010680.3-201ENST00000604215 520 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC115621.1-201ENST00000604653 858 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AL050343.2-201ENST00000607338 280 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AL596245.1-201ENST00000618994 362 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC009318.4-201ENST00000620496 486 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 FRG1KP-201ENST00000623592 341 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 CR381572.1-201ENST00000625098 102 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 AC119674.1-207ENST00000641355 633 ntBASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ZNF549Q6P9A3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.59□□□□□ -1.84
ZNF549Q6P9A3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 RNU1-64P-201ENST00000365443 163 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 RNU6-74P-201ENST00000384235 107 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 MIR3074-201ENST00000384885 81 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 MIR1-2-201ENST00000384961 85 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC105402.2-201ENST00000438503 358 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 MTCO2P29-201ENST00000465212 189 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC233702.1-201ENST00000482905 502 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 SCARNA24.1-201ENST00000516465 137 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 RN7SKP82-201ENST00000516786 223 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AP003497.1-201ENST00000528472 562 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC053481.3-201ENST00000577881 843 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 MIR3146-201ENST00000580367 79 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC006077.1-201ENST00000604746 343 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 AC005858.4-201ENST00000623191 700 ntBASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF549Q6P9A3 SAGE4P-201ENST00000442271 3381 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 RNA5SP51-201ENST00000364750 119 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 Z98941.1-201ENST00000407764 100 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 RNU2-9P-201ENST00000410194 145 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC069218.2-201ENST00000411665 344 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC004987.3-201ENST00000413879 771 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 RPL30P2-201ENST00000414021 291 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AL354751.2-201ENST00000415471 210 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
ZNF549Q6P9A3 AC127526.1-201ENST00000417526 366 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms