Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 RNU6-798P-201ENST00000516912 103 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 RPL12P50-201ENST00000603116 116 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AL033523.1-201ENST00000605153 153 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC104010.1-201ENST00000616889 150 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 SNORD39.4-201ENST00000620099 78 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC009268.2-201ENST00000621925 457 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC138915.3-201ENST00000562908 1389 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.2□□□□□ -1.9
LYSMD4Q5XG99 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC002546.1-201ENST00000588041 2504 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 Y_RNA.553-201ENST00000384670 102 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AL159169.1-201ENST00000421119 127 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 RPL17P49-201ENST00000443728 411 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 USP9YP29-201ENST00000445112 563 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AP000797.1-201ENST00000478870 387 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 MIR5697-201ENST00000578045 78 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC103987.3-201ENST00000582071 292 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 uc_338.1-201ENST00000612113 180 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC093591.3-201ENST00000634516 308 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC090582.1-201ENST00000636321 199 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 MTND5P33-201ENST00000571250 1450 ntBASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LYSMD4Q5XG99 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MIR423-201ENST00000362201 94 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RNY4P24-201ENST00000362735 96 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 SNORA7.4-201ENST00000384249 137 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MIR591-201ENST00000385290 95 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RNU6-516P-201ENST00000411381 104 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MTND1P21-201ENST00000412991 285 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC109583.1-201ENST00000432156 268 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AL353706.1-201ENST00000436728 494 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC116337.2-201ENST00000477662 156 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RPS3AP50-201ENST00000487064 803 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 RPL7P47-201ENST00000497299 556 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 ARL2BPP6-201ENST00000512757 439 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 MIR3124-201ENST00000582636 67 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 UBL5P2-201ENST00000583788 219 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC015871.2-201ENST00000603605 948 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AC103591.3-201ENST00000608684 209 ntBASIC3.18□□□□□ -1.9
LYSMD4Q5XG99 AP002826.1-201ENST00000608835 315 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms