Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 VIS1.1-201ENST00000610517 203 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC022079.2-201ENST00000619739 566 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RNU4-13P-201ENST00000364019 141 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 MTCO3P30-201ENST00000426425 670 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 POU5F1P7-201ENST00000508759 541 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RNU6-287P-201ENST00000516230 98 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AL138976.2-201ENST00000563989 694 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC010200.2-201ENST00000605098 235 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC135178.6-201ENST00000605314 398 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 ZNF209P-201ENST00000593450 2304 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 Y_RNA.28-201ENST00000362554 111 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AP000705.1-201ENST00000454567 350 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 RPS27P29-201ENST00000463110 252 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 HMGB3P15-201ENST00000507326 574 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 HSPE1P4-201ENST00000550617 308 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC0.85□□□□□ -2.27
UBR4Q5T4S7 AP006248.2-201ENST00000623309 592 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 Z69720.2-201ENST00000624755 279 ntBASIC0.85□□□□□ -2.27
UBR4Q5T4S7 ZNF720P1-201ENST00000562403 1939 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 AC073544.1-201ENST00000600110 1595 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 MIR6073-201ENST00000352083 89 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 SNORD118-201ENST00000363593 134 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 MIR708-201ENST00000390708 88 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 RPL17P49-201ENST00000443728 411 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 CREM-226ENST00000469949 721 ntTSL 3 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 TRBVB-201ENST00000477100 408 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.84□□□□□ -2.27
UBR4Q5T4S7 RNA5SP138-201ENST00000365098 114 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 MIR517C-201ENST00000385103 95 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 MIR1323-201ENST00000408090 73 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 AC098679.5-201ENST00000624394 571 ntBASIC0.84□□□□□ -2.27
UBR4Q5T4S7 AC005336.3-201ENST00000623833 2679 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 PABPC1P9-201ENST00000426076 1612 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 RNU4-73P-201ENST00000363164 141 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.514-201ENST00000384528 112 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 AC021146.7-201ENST00000509604 775 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC0.84□□□□□ -2.28
UBR4Q5T4S7 MTCO1P40-201ENST00000574371 625 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 MIR3186-201ENST00000577404 85 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC0.84□□□□□ -2.28
UBR4Q5T4S7 DEFB108F-201ENST00000344638 222 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 RNA5SP193-201ENST00000410353 107 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 DEFB108E-201ENST00000524692 240 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC0.84□□□□□ -2.28
UBR4Q5T4S7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.28
UBR4Q5T4S7 AC009229.3-201ENST00000608056 282 ntBASIC0.84□□□□□ -2.28
UBR4Q5T4S7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.28
UBR4Q5T4S7 PABPC1P7-201ENST00000413177 1513 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 RPL21P104-201ENST00000464143 478 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 RPL21P18-201ENST00000469899 480 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 RNA5SP384-201ENST00000516615 116 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC013444.2-201ENST00000603317 787 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.203-201ENST00000364106 102 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 Y_RNA.375-201ENST00000365625 101 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 SNORA18.2-201ENST00000383865 132 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 SAR1AP4-201ENST00000429225 591 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC129850.1-201ENST00000436203 508 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 MIR604-201ENST00000384880 94 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 CCNB2P1-201ENST00000399411 1150 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 DHFRP5-201ENST00000406944 564 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AL627309.6-201ENST00000606857 840 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AC016769.3-201ENST00000396562 315 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 AL139397.2-201ENST00000404529 772 ntBASIC0.83□□□□□ -2.28
UBR4Q5T4S7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBR4Q5T4S7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms