Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MRPL42P2-201ENST00000403169 426 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 RPL31P35-201ENST00000431058 377 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC090774.1-201ENST00000435925 246 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 MTATP6P23-201ENST00000440153 476 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 RPL26P6-201ENST00000440913 438 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC013267.1-201ENST00000458227 267 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AL049714.1-201ENST00000466686 347 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC084198.1-201ENST00000477747 402 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC114967.1-201ENST00000504890 259 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 HMGB1P29-201ENST00000505659 499 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 GMPSP1-201ENST00000514075 579 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 TRMT10BP1-201ENST00000519377 943 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 FAM60DP-201ENST00000524174 632 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AL391813.2-201ENST00000609113 322 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AL355472.4-201ENST00000610233 626 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 BX664608.1-201ENST00000610519 487 ntBASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.34□□□□□ -1.71
LONRF3Q496Y0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.34□□□□□ -1.72
LONRF3Q496Y0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
LONRF3Q496Y0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LONRF3Q496Y0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 RNU1-18P-201ENST00000363062 164 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 RNU2-8P-201ENST00000410727 190 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 RNU4-55P-201ENST00000410731 137 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC104850.1-201ENST00000435940 476 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL049734.2-201ENST00000441066 616 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL353572.1-201ENST00000442490 417 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 RPS3AP14-201ENST00000483907 780 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL049874.1-201ENST00000489560 388 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 SNORA70.16-201ENST00000516390 95 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 NARSP2-201ENST00000518524 679 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 SUMO2P20-201ENST00000520803 283 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 UBE2L4-201ENST00000587688 464 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC121334.2-201ENST00000605387 271 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC007014.2-201ENST00000615581 479 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL359880.1-201ENST00000621879 266 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AL158801.5-201ENST00000623123 465 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC091905.1-201ENST00000624400 311 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC012442.3-202ENST00000636742 206 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC009902.3-201ENST00000606235 2172 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 DDX10P1-201ENST00000448545 1933 ntBASIC4.33□□□□□ -1.72
LONRF3Q496Y0 AC004520.1-201ENST00000608362 1413 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RNU1-101P-201ENST00000391171 127 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RPL23AP32-201ENST00000395315 459 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 CALM2P3-201ENST00000400429 449 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL590002.1-201ENST00000406554 418 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC009237.5-201ENST00000414271 501 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC069157.1-201ENST00000421749 137 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 RPL27AP8-201ENST00000424277 446 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.32□□□□□ -1.72
LONRF3Q496Y0 AC018644.1-201ENST00000429934 551 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 MTND1P2-201ENST00000430604 821 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 VN1R34P-201ENST00000447387 883 ntBASIC4.32□□□□□ -1.72
LONRF3Q496Y0 C1DP4-201ENST00000455429 424 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 238.1 ms