Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 ASNSP3-201ENST00000451989 1306 ntBASIC3.14□□□□□ -1.91
SHROOM1Q2M3G4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC026241.1-201ENST00000517873 2142 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC009487.2-201ENST00000420969 6821 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 DEFB108F-201ENST00000344638 222 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 RNA5SP289-201ENST00000362332 137 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-289P-201ENST00000364093 107 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-343P-201ENST00000364709 104 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 OOSP1P1-201ENST00000423265 274 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC109583.1-201ENST00000432156 268 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 MTND4P6-201ENST00000438297 472 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 RPL32P28-201ENST00000443577 397 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AL353691.1-201ENST00000451332 387 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 SUMO2P2-201ENST00000456482 255 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AL590639.1-201ENST00000456484 337 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC104090.1-201ENST00000506341 1171 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 DEFB108D-201ENST00000527787 222 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 BBIP1P1-201ENST00000602999 279 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 U73023.1-201ENST00000603134 700 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC107952.2-201ENST00000606048 486 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC026790.2-201ENST00000606282 430 ntBASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHROOM1Q2M3G4 AL079343.1-201ENST00000572358 1771 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 TAB3P1-202ENST00000452645 1634 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL390862.1-201ENST00000635467 1469 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-28P-201ENST00000362378 107 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 RNU1-105P-201ENST00000363470 161 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 RNU6-621P-201ENST00000364752 109 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 RNA5SP252-201ENST00000391131 119 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 TPMTP2-201ENST00000414372 726 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 LSM1P1-201ENST00000438629 273 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 MEMO1P3-201ENST00000459811 302 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 FAM172BP-201ENST00000487497 1089 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 MTCO2P15-201ENST00000532655 656 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL133271.1-201ENST00000538229 291 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 CR383656.7-201ENST00000548164 174 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC128657.1-201ENST00000549459 145 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC009712.1-201ENST00000564938 316 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 RPL23AP88-201ENST00000605759 454 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC080013.4-201ENST00000607624 649 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AL353748.2-201ENST00000622148 471 ntBASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.12□□□□□ -1.91
SHROOM1Q2M3G4 AC005539.1-201ENST00000443768 1479 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 ANAPC10P1-201ENST00000395991 556 ntBASIC3.11□□□□□ -1.91
SHROOM1Q2M3G4 AL445529.1-201ENST00000398713 389 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms