Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PTP4A1P6-201ENST00000531034 478 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 AC092470.1-201ENST00000546187 132 ntBASIC3.5□□□□□ -1.85
LTBQ06643 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.5□□□□□ -1.85
LTBQ06643 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 AL138976.2-201ENST00000563989 694 ntBASIC3.5□□□□□ -1.85
LTBQ06643 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
LTBQ06643 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.5□□□□□ -1.85
LTBQ06643 Z84480.1-201ENST00000605131 311 ntBASIC3.5□□□□□ -1.85
LTBQ06643 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.5□□□□□ -1.85
LTBQ06643 AC006504.8-201ENST00000621046 635 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC093648.1-201ENST00000623546 606 ntBASIC3.5□□□□□ -1.85
LTBQ06643 AC112487.2-201ENST00000637950 304 ntBASIC3.5□□□□□ -1.85
LTBQ06643 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LTBQ06643 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.5□□□□□ -1.85
LTBQ06643 PNPT1P2-201ENST00000456768 2050 ntBASIC3.5□□□□□ -1.85
LTBQ06643 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.5□□□□□ -1.85
LTBQ06643 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
LTBQ06643 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
LTBQ06643 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 RNU1-18P-201ENST00000363062 164 ntBASIC3.49□□□□□ -1.85
LTBQ06643 Y_RNA.356-201ENST00000365475 113 ntBASIC3.49□□□□□ -1.85
LTBQ06643 SNORA69-201ENST00000383895 132 ntBASIC3.49□□□□□ -1.85
LTBQ06643 Y_RNA.535-201ENST00000384612 99 ntBASIC3.49□□□□□ -1.85
LTBQ06643 RNU6-1011P-201ENST00000384668 107 ntBASIC3.49□□□□□ -1.85
LTBQ06643 RNU2-9P-201ENST00000410194 145 ntBASIC3.49□□□□□ -1.85
LTBQ06643 RNU6-1068P-201ENST00000410958 103 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 MRPL50P2-201ENST00000416821 482 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 AL513185.2-201ENST00000425543 193 ntBASIC3.49□□□□□ -1.85
LTBQ06643 OR4F13P-201ENST00000428478 931 ntBASIC3.49□□□□□ -1.85
LTBQ06643 HMGN2P31-201ENST00000432430 273 ntBASIC3.49□□□□□ -1.85
LTBQ06643 RPS6P12-201ENST00000432491 726 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AC127537.2-201ENST00000439258 465 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AC093019.1-201ENST00000443135 252 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 RPL7P52-201ENST00000449200 742 ntBASIC3.49□□□□□ -1.85
LTBQ06643 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 RPS3AP50-201ENST00000487064 803 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 RNA5SP337-201ENST00000517007 109 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.49□□□□□ -1.85
LTBQ06643 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 AP000907.2-201ENST00000530827 353 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.49□□□□□ -1.85
LTBQ06643 MIR3146-201ENST00000580367 79 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.49□□□□□ -1.85
LTBQ06643 AC025946.2-201ENST00000603398 234 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC113194.1-201ENST00000606037 500 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 AL596245.1-201ENST00000618994 362 ntBASIC3.49□□□□□ -1.85
LTBQ06643 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
LTBQ06643 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
LTBQ06643 CKAP2P1-201ENST00000555477 2049 ntBASIC3.49□□□□□ -1.85
LTBQ06643 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 AC006026.1-201ENST00000444025 1803 ntBASIC3.49□□□□□ -1.85
LTBQ06643 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
LTBQ06643 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LTBQ06643 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LTBQ06643 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.48□□□□□ -1.85
LTBQ06643 MTND5P17-201ENST00000418405 1603 ntBASIC3.48□□□□□ -1.85
LTBQ06643 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LTBQ06643 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LTBQ06643 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LTBQ06643 RNA5SP258-201ENST00000362750 119 ntBASIC3.48□□□□□ -1.85
LTBQ06643 RNU6-1120P-201ENST00000362988 108 ntBASIC3.48□□□□□ -1.85
LTBQ06643 RNU4-73P-201ENST00000363164 141 ntBASIC3.48□□□□□ -1.85
LTBQ06643 Y_RNA.142-201ENST00000363491 102 ntBASIC3.48□□□□□ -1.85
LTBQ06643 RN7SKP44-201ENST00000363602 316 ntBASIC3.48□□□□□ -1.85
LTBQ06643 Y_RNA.529-201ENST00000384586 119 ntBASIC3.48□□□□□ -1.85
LTBQ06643 MIR199A2-201ENST00000385289 110 ntBASIC3.48□□□□□ -1.85
LTBQ06643 MT-TD-201ENST00000387419 68 ntBASIC3.48□□□□□ -1.85
LTBQ06643 AC004987.3-201ENST00000413879 771 ntBASIC3.48□□□□□ -1.85
LTBQ06643 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.48□□□□□ -1.85
LTBQ06643 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.48□□□□□ -1.85
LTBQ06643 SEPT14P3-201ENST00000439401 183 ntBASIC3.48□□□□□ -1.85
LTBQ06643 BNIP3P2-201ENST00000441221 577 ntBASIC3.48□□□□□ -1.85
LTBQ06643 CALM1P1-201ENST00000442082 433 ntBASIC3.48□□□□□ -1.85
LTBQ06643 AL732372.2-207ENST00000445840 183 ntBASIC3.48□□□□□ -1.85
LTBQ06643 SEPT14P2-201ENST00000453405 183 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms