Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL136372.1-201ENST00000403060 228 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 CCDC58P2-201ENST00000417131 366 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.13□□□□□ -1.91
GABPAQ06546 AL022400.1-201ENST00000423946 935 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.13□□□□□ -1.91
GABPAQ06546 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.13□□□□□ -1.91
GABPAQ06546 AC024082.2-201ENST00000434771 238 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 THAP5P1-201ENST00000439089 262 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.13□□□□□ -1.91
GABPAQ06546 OR6K5P-201ENST00000447050 945 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.13□□□□□ -1.91
GABPAQ06546 AC096725.1-201ENST00000514266 313 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 MTND5P4-201ENST00000514978 288 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 RNA5SP216-201ENST00000516111 123 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 RNU6-528P-201ENST00000516926 100 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.13□□□□□ -1.91
GABPAQ06546 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.13□□□□□ -1.91
GABPAQ06546 AC234778.2-201ENST00000566241 354 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 MIR4999-201ENST00000585029 91 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AC063944.3-201ENST00000609969 533 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AC087683.2-201ENST00000611384 326 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AC002550.2-201ENST00000621246 394 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.13□□□□□ -1.91
GABPAQ06546 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GABPAQ06546 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
GABPAQ06546 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GABPAQ06546 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.13□□□□□ -1.91
GABPAQ06546 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GABPAQ06546 RPL21P132-201ENST00000331267 462 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 RNU6-723P-201ENST00000383973 107 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
GABPAQ06546 MTND4P13-201ENST00000402078 1023 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 RPS15AP38-201ENST00000413110 372 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AL035407.1-201ENST00000429211 571 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 OR4K11P-201ENST00000431829 904 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.12□□□□□ -1.91
GABPAQ06546 MTCO1P27-201ENST00000448269 226 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.12□□□□□ -1.91
GABPAQ06546 RPS27AP1-201ENST00000475545 471 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 MTND2P14-201ENST00000482139 351 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.12□□□□□ -1.91
GABPAQ06546 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.12□□□□□ -1.91
GABPAQ06546 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.12□□□□□ -1.91
GABPAQ06546 HSPE1P23-201ENST00000509838 286 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.12□□□□□ -1.91
GABPAQ06546 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.12□□□□□ -1.91
GABPAQ06546 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
GABPAQ06546 ELOCP32-201ENST00000548625 324 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AC090888.2-201ENST00000559765 1144 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AP001429.1-201ENST00000602568 530 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AL158211.4-201ENST00000606988 584 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AL355816.2-201ENST00000610049 647 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 VIS1.1-201ENST00000610517 203 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AL110115.1-201ENST00000614396 364 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AC092608.2-201ENST00000624427 218 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 AP000676.4-201ENST00000624659 623 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
GABPAQ06546 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.12□□□□□ -1.91
GABPAQ06546 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GABPAQ06546 AC087359.1-201ENST00000508335 1740 ntBASIC3.12□□□□□ -1.91
GABPAQ06546 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
GABPAQ06546 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
GABPAQ06546 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GABPAQ06546 AP000568.1-201ENST00000282964 442 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RNA5SP88-201ENST00000365560 109 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GABPAQ06546 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AL591034.1-201ENST00000407447 340 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC009963.1-201ENST00000417265 157 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 SNORD121B-201ENST00000458838 81 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RN7SL429P-201ENST00000479090 223 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RN7SL489P-201ENST00000486185 223 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RN7SL327P-201ENST00000488659 223 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RN7SL283P-201ENST00000489055 303 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
GABPAQ06546 AP001804.3-201ENST00000525146 880 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GABPAQ06546 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
GABPAQ06546 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.11□□□□□ -1.91
GABPAQ06546 AL512310.1-201ENST00000548639 172 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.11□□□□□ -1.91
GABPAQ06546 COX6CP3-201ENST00000580869 223 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.11□□□□□ -1.91
GABPAQ06546 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.11□□□□□ -1.91
GABPAQ06546 AC024560.3-201ENST00000608482 349 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 AL450472.3-201ENST00000615578 367 ntBASIC3.11□□□□□ -1.91
GABPAQ06546 RN7SL853P-201ENST00000617250 223 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms