Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RPL26P37-201ENST00000411983 438 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 BMI1P1-201ENST00000445879 941 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 RPL31P41-201ENST00000477967 372 ntBASIC0.96□□□□□ -2.26
PRKDCP78527 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.96□□□□□ -2.26
PRKDCP78527 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PRKDCP78527 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PRKDCP78527 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.95□□□□□ -2.26
PRKDCP78527 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.95□□□□□ -2.26
PRKDCP78527 AL691517.1-201ENST00000440833 1235 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 RPS27AP10-201ENST00000496103 208 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.95□□□□□ -2.26
PRKDCP78527 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 MIR5694-201ENST00000581190 76 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.95□□□□□ -2.26
PRKDCP78527 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.95□□□□□ -2.26
PRKDCP78527 MIR2909-201ENST00000617113 69 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 SNORA18.2-201ENST00000383865 132 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC009965.2-201ENST00000425328 970 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 RPL23AP41-201ENST00000484754 458 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 DNAJC8P1-201ENST00000554535 372 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 LLPHP1-201ENST00000603571 367 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC013553.2-201ENST00000604244 589 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AL158801.5-201ENST00000623123 465 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC007342.9-201ENST00000623877 1385 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
PRKDCP78527 AL121871.1-201ENST00000443413 436 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.95□□□□□ -2.26
PRKDCP78527 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
PRKDCP78527 RNA5SP82-201ENST00000516707 92 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.95□□□□□ -2.26
PRKDCP78527 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.95□□□□□ -2.26
PRKDCP78527 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.95□□□□□ -2.26
PRKDCP78527 XIST_intron.1-201ENST00000619444 68 ntBASIC0.95□□□□□ -2.26
PRKDCP78527 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
PRKDCP78527 RNU4-65P-201ENST00000410473 140 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 ELOCP6-201ENST00000429066 328 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 VN1R108P-201ENST00000431580 830 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 ELOCP12-201ENST00000458706 328 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RNU1-40P-201ENST00000516816 164 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RNU1-97P-201ENST00000516872 164 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AC090740.1-201ENST00000623193 2262 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 XKRY2-202ENST00000623874 1581 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 XKRY-202ENST00000624960 1581 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AL157700.1-201ENST00000561973 1432 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.94□□□□□ -2.26
PRKDCP78527 RPS12P24-201ENST00000412619 387 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RPL30P3-201ENST00000424262 333 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 OR10R1P-201ENST00000441524 1141 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 NPM1P52-201ENST00000518264 846 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PRKDCP78527 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PRKDCP78527 OR4K8P-201ENST00000578842 1048 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AL138955.1-201ENST00000622881 1040 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
PRKDCP78527 Y_RNA.303-201ENST00000364998 94 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RNA5SP354-201ENST00000391247 136 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 Z85995.1-201ENST00000415547 335 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.94□□□□□ -2.26
PRKDCP78527 MTND5P25-201ENST00000430499 799 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.94□□□□□ -2.26
PRKDCP78527 HSPE1P22-201ENST00000456856 327 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 RPS26P21-201ENST00000475397 348 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.94□□□□□ -2.26
PRKDCP78527 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
PRKDCP78527 AL589935.2-201ENST00000616471 1231 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 DUXAP9-208ENST00000622815 614 ntBASIC0.94□□□□□ -2.26
PRKDCP78527 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.94□□□□□ -2.26
PRKDCP78527 AC013268.2-201ENST00000420753 337 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.93□□□□□ -2.26
PRKDCP78527 AC022447.3-201ENST00000506865 495 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.93□□□□□ -2.26
PRKDCP78527 AC011472.4-201ENST00000615848 491 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AL359851.1-201ENST00000569460 4997 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 RNU6-799P-201ENST00000363567 107 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 RN7SKP200-201ENST00000410564 320 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 PRELID3BP11-201ENST00000414230 479 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AC244636.1-201ENST00000421152 228 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 RPL17P49-201ENST00000443728 411 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.93□□□□□ -2.26
PRKDCP78527 Y_RNA.675-201ENST00000516389 149 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 MTCO1P47-201ENST00000523889 1271 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.93□□□□□ -2.26
PRKDCP78527 SEPT7P9-203ENST00000604116 343 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.93□□□□□ -2.26
PRKDCP78527 AL354685.2-201ENST00000448218 1447 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.93□□□□□ -2.26
PRKDCP78527 Y_RNA.471-201ENST00000384312 102 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AC069277.2-201ENST00000454211 432 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.93□□□□□ -2.26
PRKDCP78527 AL109933.3-201ENST00000619095 188 ntBASIC0.93□□□□□ -2.26
PRKDCP78527 MIR203B-201ENST00000636080 86 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms