Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 CIR1P1-201ENST00000524055 1133 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA4P78363 MED28P6-201ENST00000558776 231 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL731537.2-201ENST00000561565 951 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA4P78363 MTND5P35-201ENST00000557537 1720 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
ABCA4P78363 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA4P78363 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA4P78363 OR51B8P-201ENST00000449892 769 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.45□□□□□ -2.18
ABCA4P78363 BTF3P12-201ENST00000519620 469 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC023158.1-201ENST00000561632 1025 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA4P78363 AL355812.1-201ENST00000603215 216 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC025594.3-201ENST00000613068 790 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC005296.1-201ENST00000616145 209 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
ABCA4P78363 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.45□□□□□ -2.18
ABCA4P78363 AC007342.9-201ENST00000623877 1385 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 RPL7P37-201ENST00000425095 738 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AC234781.2-201ENST00000426370 994 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.44□□□□□ -2.18
ABCA4P78363 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.44□□□□□ -2.18
ABCA4P78363 MTCYBP45-201ENST00000435243 565 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 YWHAZP8-201ENST00000436935 731 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.44□□□□□ -2.18
ABCA4P78363 RNA5SP310-201ENST00000459084 116 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AC087588.1-201ENST00000462203 316 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 HMGN1P8-201ENST00000463578 288 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AC090515.1-201ENST00000465295 476 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 RNA5SP82-201ENST00000516707 92 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.44□□□□□ -2.18
ABCA4P78363 MIR4419B-201ENST00000577260 68 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.44□□□□□ -2.18
ABCA4P78363 AC126118.1-201ENST00000607744 628 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 AC097372.4-201ENST00000625025 466 ntBASIC1.44□□□□□ -2.18
ABCA4P78363 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
ABCA4P78363 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
ABCA4P78363 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ABCA4P78363 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
ABCA4P78363 ERHP2-201ENST00000402323 299 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AC073264.1-201ENST00000411508 416 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 POLR2J4-204ENST00000418424 324 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 UBE2V1P5-201ENST00000440070 405 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 NAP1L1P3-201ENST00000462291 880 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AC019176.1-201ENST00000518519 225 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.43□□□□□ -2.18
ABCA4P78363 MYL12BP1-201ENST00000569826 507 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 MIR5694-201ENST00000581190 76 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 MIR3199-2-201ENST00000636243 86 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 RNA5SP393-201ENST00000363423 117 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 SFR1P1-201ENST00000403720 688 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 FO393414.1-201ENST00000428697 1184 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.43□□□□□ -2.18
ABCA4P78363 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.43□□□□□ -2.18
ABCA4P78363 AL645638.1-201ENST00000440519 361 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.43□□□□□ -2.18
ABCA4P78363 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.43□□□□□ -2.18
ABCA4P78363 RPL37P25-201ENST00000507308 276 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 AC008885.2-201ENST00000509506 930 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
ABCA4P78363 AC067904.2-201ENST00000517322 1283 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.43□□□□□ -2.18
ABCA4P78363 AC023824.2-201ENST00000566185 400 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 MIR4446-201ENST00000578505 67 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
ABCA4P78363 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.43□□□□□ -2.18
ABCA4P78363 SNHG22-203ENST00000617833 660 ntBASIC1.43□□□□□ -2.18
ABCA4P78363 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 CCT4P2-201ENST00000233836 1548 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 RPS3AP9-201ENST00000417027 792 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL356320.2-201ENST00000417263 507 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA4P78363 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA4P78363 SUMO1P4-201ENST00000429430 302 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 BNIP3P2-201ENST00000441221 577 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.42□□□□□ -2.18
ABCA4P78363 TPT1P14-201ENST00000448018 505 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 MTND2P19-201ENST00000449129 1012 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.42□□□□□ -2.18
ABCA4P78363 AC135721.1-201ENST00000497954 479 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.42□□□□□ -2.18
ABCA4P78363 MIR4285-201ENST00000581001 85 ntBASIC1.42□□□□□ -2.18
ABCA4P78363 AC113368.1-201ENST00000603736 382 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms