Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC106052.1-201ENST00000608029 497 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC007038.2-201ENST00000608095 740 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC245100.7-201ENST00000609678 442 ntBASIC1.82□□□□□ -2.12
VBP1P61758 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VBP1P61758 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
VBP1P61758 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VBP1P61758 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.81□□□□□ -2.12
VBP1P61758 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VBP1P61758 RNU6-234P-201ENST00000365229 104 ntBASIC1.81□□□□□ -2.12
VBP1P61758 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.81□□□□□ -2.12
VBP1P61758 MIR218-1-201ENST00000384999 110 ntBASIC1.81□□□□□ -2.12
VBP1P61758 RNU2-49P-201ENST00000410666 184 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.81□□□□□ -2.12
VBP1P61758 AC096649.2-201ENST00000416186 393 ntBASIC1.81□□□□□ -2.12
VBP1P61758 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.81□□□□□ -2.12
VBP1P61758 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.81□□□□□ -2.12
VBP1P61758 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.81□□□□□ -2.12
VBP1P61758 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.81□□□□□ -2.12
VBP1P61758 RN7SL636P-201ENST00000497504 294 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.81□□□□□ -2.12
VBP1P61758 SCARNA16.3-201ENST00000516595 184 ntBASIC1.81□□□□□ -2.12
VBP1P61758 SNORA67.7-201ENST00000516664 135 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC113192.3-201ENST00000529152 742 ntBASIC1.81□□□□□ -2.12
VBP1P61758 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.81□□□□□ -2.12
VBP1P61758 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.81□□□□□ -2.12
VBP1P61758 SNORD39.3-201ENST00000584451 71 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC104307.1-201ENST00000616142 196 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC107905.1-201ENST00000616204 426 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AC006133.1-201ENST00000617106 264 ntBASIC1.81□□□□□ -2.12
VBP1P61758 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VBP1P61758 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.81□□□□□ -2.12
VBP1P61758 AL137790.1-201ENST00000634283 177 ntBASIC1.81□□□□□ -2.12
VBP1P61758 GDI2P1-201ENST00000429312 1336 ntBASIC1.81□□□□□ -2.12
VBP1P61758 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VBP1P61758 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
VBP1P61758 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VBP1P61758 MIR135A2-201ENST00000384854 100 ntBASIC1.8□□□□□ -2.12
VBP1P61758 RNU2-15P-201ENST00000410692 191 ntBASIC1.8□□□□□ -2.12
VBP1P61758 BEND7P1-201ENST00000422058 457 ntBASIC1.8□□□□□ -2.12
VBP1P61758 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.8□□□□□ -2.12
VBP1P61758 AC027124.2-201ENST00000428249 105 ntBASIC1.8□□□□□ -2.12
VBP1P61758 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.8□□□□□ -2.12
VBP1P61758 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.8□□□□□ -2.12
VBP1P61758 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.8□□□□□ -2.12
VBP1P61758 S100A11P2-201ENST00000467589 312 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AL121769.1-201ENST00000469473 401 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AC080014.1-201ENST00000496877 1201 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AC008526.1-201ENST00000509149 338 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AC098591.2-201ENST00000510152 315 ntBASIC1.8□□□□□ -2.12
VBP1P61758 RNA5SP356-201ENST00000515972 94 ntBASIC1.8□□□□□ -2.12
VBP1P61758 RNA5SP148-201ENST00000516527 94 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.8□□□□□ -2.12
VBP1P61758 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.8□□□□□ -2.12
VBP1P61758 SETP7-201ENST00000552169 453 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AL671309.1-201ENST00000603750 544 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AL031176.1-201ENST00000604554 466 ntBASIC1.8□□□□□ -2.12
VBP1P61758 AC068276.1-201ENST00000605793 379 ntBASIC1.8□□□□□ -2.12
VBP1P61758 ADAM3A-203ENST00000461344 2157 ntBASIC1.8□□□□□ -2.12
VBP1P61758 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
VBP1P61758 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
VBP1P61758 AL390862.1-201ENST00000635467 1469 ntBASIC1.8□□□□□ -2.12
VBP1P61758 ELF2P3-201ENST00000445099 1506 ntBASIC1.8□□□□□ -2.12
VBP1P61758 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
VBP1P61758 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
VBP1P61758 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.79□□□□□ -2.12
VBP1P61758 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.79□□□□□ -2.12
VBP1P61758 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.79□□□□□ -2.12
VBP1P61758 AC019097.1-201ENST00000424783 735 ntBASIC1.79□□□□□ -2.12
VBP1P61758 YME1L1P1-201ENST00000429435 297 ntBASIC1.79□□□□□ -2.12
VBP1P61758 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.79□□□□□ -2.12
VBP1P61758 THAP5P1-201ENST00000439089 262 ntBASIC1.79□□□□□ -2.12
VBP1P61758 DNAJC19P4-201ENST00000440115 345 ntBASIC1.79□□□□□ -2.12
VBP1P61758 PIGFP3-201ENST00000441918 722 ntBASIC1.79□□□□□ -2.12
VBP1P61758 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
VBP1P61758 AP1S2P1-201ENST00000457344 379 ntBASIC1.79□□□□□ -2.12
VBP1P61758 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.79□□□□□ -2.12
VBP1P61758 AC006499.2-201ENST00000513470 337 ntBASIC1.79□□□□□ -2.12
VBP1P61758 SCARNA15.2-201ENST00000516409 127 ntBASIC1.79□□□□□ -2.12
VBP1P61758 RPL7P20-201ENST00000520308 745 ntBASIC1.79□□□□□ -2.12
VBP1P61758 CR383656.7-201ENST00000548164 174 ntBASIC1.79□□□□□ -2.12
VBP1P61758 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VBP1P61758 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.79□□□□□ -2.12
VBP1P61758 AC243960.4-201ENST00000600532 288 ntBASIC1.79□□□□□ -2.12
VBP1P61758 AC024220.1-201ENST00000603675 484 ntBASIC1.79□□□□□ -2.12
VBP1P61758 MIR6817-201ENST00000615588 66 ntBASIC1.79□□□□□ -2.12
VBP1P61758 FRG1HP-204ENST00000617940 757 ntBASIC1.79□□□□□ -2.12
VBP1P61758 MTCO1P18-201ENST00000455518 1419 ntBASIC1.79□□□□□ -2.12
VBP1P61758 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.79□□□□□ -2.12
VBP1P61758 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
VBP1P61758 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
VBP1P61758 RNU6-217P-201ENST00000384164 104 ntBASIC1.78□□□□□ -2.12
VBP1P61758 MIR196B-201ENST00000384852 84 ntBASIC1.78□□□□□ -2.12
VBP1P61758 AC016769.3-201ENST00000396562 315 ntBASIC1.78□□□□□ -2.12
VBP1P61758 AL161449.1-201ENST00000414531 1199 ntBASIC1.78□□□□□ -2.12
VBP1P61758 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
VBP1P61758 AC063976.3-201ENST00000426849 329 ntBASIC1.78□□□□□ -2.12
VBP1P61758 MTCYBP45-201ENST00000435243 565 ntBASIC1.78□□□□□ -2.12
VBP1P61758 UBE2D3P1-201ENST00000436669 444 ntBASIC1.78□□□□□ -2.12
VBP1P61758 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms