Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC104978.1-201ENST00000449387 391 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 DUXAP8-207ENST00000456786 622 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC092798.1-201ENST00000458542 409 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC104563.1-201ENST00000476147 376 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC126182.1-201ENST00000478134 357 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AL135752.1-201ENST00000479477 471 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.59□□□□□ -1.99
PKNOX1P55347 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC147055.4-201ENST00000504399 745 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC022080.3-201ENST00000544433 482 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PKNOX1P55347 AL049838.1-201ENST00000563647 981 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC005951.2-201ENST00000576282 495 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.59□□□□□ -1.99
PKNOX1P55347 AC079089.3-201ENST00000603094 673 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AL596327.1-201ENST00000603629 213 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 AC112220.3-201ENST00000605502 502 ntBASIC2.59□□□□□ -1.99
PKNOX1P55347 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PKNOX1P55347 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
PKNOX1P55347 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.58□□□□□ -2
PKNOX1P55347 SDAD1P2-201ENST00000441308 2028 ntBASIC2.58□□□□□ -2
PKNOX1P55347 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.58□□□□□ -2
PKNOX1P55347 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.58□□□□□ -2
PKNOX1P55347 AC087499.2-201ENST00000432861 149 ntBASIC2.58□□□□□ -2
PKNOX1P55347 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 MTND3P1-201ENST00000441336 220 ntBASIC2.58□□□□□ -2
PKNOX1P55347 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.58□□□□□ -2
PKNOX1P55347 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.58□□□□□ -2
PKNOX1P55347 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC009237.8-201ENST00000445492 379 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.58□□□□□ -2
PKNOX1P55347 MTCO1P27-201ENST00000448269 226 ntBASIC2.58□□□□□ -2
PKNOX1P55347 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 RPS27P27-201ENST00000498779 255 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
PKNOX1P55347 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 SCARNA15.2-201ENST00000516409 127 ntBASIC2.58□□□□□ -2
PKNOX1P55347 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.58□□□□□ -2
PKNOX1P55347 ACTR3BP3-201ENST00000565577 979 ntBASIC2.58□□□□□ -2
PKNOX1P55347 MIR1254-2-201ENST00000579553 63 ntBASIC2.58□□□□□ -2
PKNOX1P55347 MIR5195-201ENST00000583555 115 ntBASIC2.58□□□□□ -2
PKNOX1P55347 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.58□□□□□ -2
PKNOX1P55347 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.58□□□□□ -2
PKNOX1P55347 U73023.1-201ENST00000603134 700 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC011458.1-201ENST00000604034 617 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC007179.3-201ENST00000604976 235 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AP000484.1-201ENST00000620067 1252 ntBASIC2.58□□□□□ -2
PKNOX1P55347 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.58□□□□□ -2
PKNOX1P55347 AC079228.1-201ENST00000624774 1049 ntBASIC2.58□□□□□ -2
PKNOX1P55347 AC008669.1-201ENST00000565823 2178 ntBASIC2.58□□□□□ -2
PKNOX1P55347 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PKNOX1P55347 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
PKNOX1P55347 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX1P55347 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKNOX1P55347 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PKNOX1P55347 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKNOX1P55347 RNU6-637P-201ENST00000384050 107 ntBASIC2.57□□□□□ -2
PKNOX1P55347 MIR325-201ENST00000385260 98 ntBASIC2.57□□□□□ -2
PKNOX1P55347 TPMTP3-201ENST00000411928 735 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX1P55347 AL590383.1-201ENST00000428602 75 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL117351.1-201ENST00000438864 766 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 SRIP1-201ENST00000489235 288 ntBASIC2.57□□□□□ -2
PKNOX1P55347 DSTNP2-201ENST00000504533 515 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX1P55347 MTND5P4-201ENST00000514978 288 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX1P55347 AC100870.1-201ENST00000522035 505 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC087373.1-201ENST00000524920 491 ntBASIC2.57□□□□□ -2
PKNOX1P55347 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX1P55347 AC123904.3-201ENST00000547218 814 ntBASIC2.57□□□□□ -2
PKNOX1P55347 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.57□□□□□ -2
PKNOX1P55347 AMZ2P1-203ENST00000565833 850 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX1P55347 UBE2L4-201ENST00000587688 464 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 AC020895.1-201ENST00000595362 272 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 AC024220.1-201ENST00000603675 484 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL158042.1-201ENST00000605338 460 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms