Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 Y_RNA.132-201ENST00000363421 102 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 RNY1P12-201ENST00000364251 105 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 RNU6-108P-201ENST00000365558 107 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 MIR199A2-201ENST00000385289 110 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 RN7SKP32-201ENST00000410167 303 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 RN7SKP27-201ENST00000410684 333 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL139247.1-201ENST00000422768 325 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 MTND2P23-201ENST00000422990 651 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC008065.1-201ENST00000428525 348 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC024082.2-201ENST00000434771 238 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 snoU13.7-201ENST00000459220 104 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 RNA5SP337-201ENST00000517007 109 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC022695.1-201ENST00000522089 237 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 OR4R1P-201ENST00000529879 463 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AP000907.2-201ENST00000530827 353 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 CYCSP30-201ENST00000546447 172 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 HMGB1P6-201ENST00000569046 646 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL162730.1-201ENST00000605734 292 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL591424.2-201ENST00000617023 128 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 C2orf27A-204ENST00000623058 969 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
CACNA2D1P54289 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
CACNA2D1P54289 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CACNA2D1P54289 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 RNA5SP97-201ENST00000365006 84 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 MIR554-201ENST00000384874 96 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AL024474.1-201ENST00000404655 591 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 RPL31P45-201ENST00000419532 356 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 MTCO3P46-201ENST00000425787 232 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AL590233.1-201ENST00000430017 456 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AL138799.3-201ENST00000438968 350 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 NOTCH2P1-201ENST00000443481 624 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 NIPA2P5-201ENST00000452282 464 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 RNU7-63P-201ENST00000459054 62 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 PLGLA-201ENST00000465668 449 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 RPS20P21-201ENST00000466859 343 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC005726.1-201ENST00000494679 427 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 EIF4EP3-201ENST00000498782 656 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 BTF3L4P4-201ENST00000506381 449 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 TXNP6-201ENST00000510190 310 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC093677.1-201ENST00000514414 678 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 SCARNA24.1-201ENST00000516465 137 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 SNORA67.7-201ENST00000516664 135 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 SUB1P1-201ENST00000524415 382 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 MIR4504-201ENST00000577413 92 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC098848.2-201ENST00000588023 330 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 OR6R2P-201ENST00000609216 300 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 CYP3A51P-201ENST00000633513 256 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 AC012442.3-202ENST00000636742 206 ntBASIC4.06□□□□□ -1.76
CACNA2D1P54289 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.06□□□□□ -1.76
CACNA2D1P54289 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CACNA2D1P54289 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms