Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC127502.3-201ENST00000636170 1206 ntBASIC3.35□□□□□ -1.87
LIMK1P53667 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK1P53667 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK1P53667 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
LIMK1P53667 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK1P53667 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK1P53667 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK1P53667 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIMK1P53667 RNU6-76P-201ENST00000384060 104 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RNU6-769P-201ENST00000384407 104 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AL049545.1-201ENST00000401856 572 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RNU4-72P-201ENST00000410754 173 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC017079.2-201ENST00000416102 485 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC092447.3-201ENST00000426027 686 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RSU1P2-202ENST00000437884 485 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK1P53667 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RPS4XP2-201ENST00000458402 793 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK1P53667 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.34□□□□□ -1.87
LIMK1P53667 SNORA70.16-201ENST00000516390 95 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RNU6-840P-201ENST00000517275 65 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK1P53667 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK1P53667 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIMK1P53667 PCMTD1P2-201ENST00000565017 355 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC079089.3-201ENST00000603094 673 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC112187.2-201ENST00000604345 283 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.34□□□□□ -1.87
LIMK1P53667 AC004223.4-201ENST00000612426 332 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LIMK1P53667 AF246928.1-201ENST00000623768 87 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC079248.2-201ENST00000623779 326 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC112204.3-201ENST00000623822 332 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC091965.5-201ENST00000624785 342 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 AC019226.1-201ENST00000625666 515 ntBASIC3.34□□□□□ -1.87
LIMK1P53667 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LIMK1P53667 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.34□□□□□ -1.87
LIMK1P53667 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
LIMK1P53667 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
LIMK1P53667 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK1P53667 DDX10P1-201ENST00000448545 1933 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 FRG1CP-201ENST00000358464 769 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RNU5A-2P-201ENST00000384337 116 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LIMK1P53667 U8.14-201ENST00000390843 143 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 MIR1290-201ENST00000408735 78 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 MTND1P21-201ENST00000412991 285 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 OOSP1P1-201ENST00000423265 274 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 RPL7L1P10-201ENST00000427790 463 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 RPL37P21-201ENST00000435890 276 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RPL35AP22-201ENST00000436855 335 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RPL26P6-201ENST00000440913 438 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK1P53667 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.33□□□□□ -1.88
LIMK1P53667 MTCO2P6-201ENST00000463134 685 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 SETP11-201ENST00000473027 690 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC084357.1-201ENST00000473404 255 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RPL31P60-201ENST00000478450 367 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 ARL4AP2-201ENST00000507378 601 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 RNU6-759P-201ENST00000516740 103 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 SNORA31.26-201ENST00000517250 137 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK1P53667 TRAV37-201ENST00000553906 342 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK1P53667 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
LIMK1P53667 TPMTP1-201ENST00000592307 737 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AL603755.1-201ENST00000619504 163 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.33□□□□□ -1.88
LIMK1P53667 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC006927.3-201ENST00000638789 384 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 AC009902.3-201ENST00000606235 2172 ntBASIC3.33□□□□□ -1.88
LIMK1P53667 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIMK1P53667 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LIMK1P53667 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
LIMK1P53667 RNU6-501P-201ENST00000364072 100 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.32□□□□□ -1.88
LIMK1P53667 RNU6-920P-201ENST00000410926 92 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 TPMTP3-201ENST00000411928 735 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 AL139413.1-201ENST00000421309 217 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 RPS27AP14-201ENST00000422868 454 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 AL365203.2-201ENST00000423444 196 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 MTATP6P17-201ENST00000431030 672 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 RPL23AP58-201ENST00000440453 469 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 ZNF114P1-201ENST00000453500 292 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 AC092798.1-201ENST00000458542 409 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
LIMK1P53667 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.32□□□□□ -1.88
LIMK1P53667 AF131216.2-201ENST00000512316 564 ntBASIC3.32□□□□□ -1.88
LIMK1P53667 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms