Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.32□□□□□ -1.88
LBX1P52954 AC244035.1-201ENST00000430042 390 ntBASIC3.32□□□□□ -1.88
LBX1P52954 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.32□□□□□ -1.88
LBX1P52954 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
LBX1P52954 FAM103A2P-201ENST00000444122 354 ntBASIC3.32□□□□□ -1.88
LBX1P52954 MTND2P22-201ENST00000444325 1033 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AP000542.1-201ENST00000448473 371 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AL122001.1-201ENST00000457027 370 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
LBX1P52954 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.32□□□□□ -1.88
LBX1P52954 SNORA70.14-201ENST00000516205 110 ntBASIC3.32□□□□□ -1.88
LBX1P52954 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.32□□□□□ -1.88
LBX1P52954 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LBX1P52954 AP004242.1-201ENST00000533701 349 ntBASIC3.32□□□□□ -1.88
LBX1P52954 OR6C73P-201ENST00000546432 358 ntBASIC3.32□□□□□ -1.88
LBX1P52954 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.32□□□□□ -1.88
LBX1P52954 PIGPP4-201ENST00000584447 307 ntBASIC3.32□□□□□ -1.88
LBX1P52954 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LBX1P52954 AC092354.1-201ENST00000606057 376 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AC080013.6-201ENST00000606185 215 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AC103710.3-201ENST00000608157 948 ntBASIC3.32□□□□□ -1.88
LBX1P52954 AL353748.2-201ENST00000622148 471 ntBASIC3.32□□□□□ -1.88
LBX1P52954 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LBX1P52954 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LBX1P52954 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 RNA5SP289-201ENST00000362332 137 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RNU6-359P-201ENST00000365466 108 ntBASIC3.31□□□□□ -1.88
LBX1P52954 SNORD116-1-201ENST00000384335 95 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AL021407.1-201ENST00000404531 386 ntBASIC3.31□□□□□ -1.88
LBX1P52954 MIR1305-201ENST00000408300 86 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RNU4-26P-201ENST00000410270 107 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RNU2-15P-201ENST00000410692 191 ntBASIC3.31□□□□□ -1.88
LBX1P52954 TPMTP3-201ENST00000411928 735 ntBASIC3.31□□□□□ -1.88
LBX1P52954 MTATP6P27-201ENST00000416987 621 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RPL21P109-201ENST00000422213 475 ntBASIC3.31□□□□□ -1.88
LBX1P52954 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.31□□□□□ -1.88
LBX1P52954 SDCBPP1-201ENST00000440192 890 ntBASIC3.31□□□□□ -1.88
LBX1P52954 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.31□□□□□ -1.88
LBX1P52954 MRPS31P2-201ENST00000451581 518 ntBASIC3.31□□□□□ -1.88
LBX1P52954 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.31□□□□□ -1.88
LBX1P52954 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.31□□□□□ -1.88
LBX1P52954 AC072039.1-201ENST00000477611 581 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RPS3AP50-201ENST00000487064 803 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC078918.1-201ENST00000498515 228 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC022447.3-201ENST00000506865 495 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC117522.2-201ENST00000510049 657 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LBX1P52954 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.31□□□□□ -1.88
LBX1P52954 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.31□□□□□ -1.88
LBX1P52954 AP003497.1-201ENST00000528472 562 ntBASIC3.31□□□□□ -1.88
LBX1P52954 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.31□□□□□ -1.88
LBX1P52954 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
LBX1P52954 DUXAP11-201ENST00000603858 526 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AL022161.1-201ENST00000604390 213 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC004853.1-201ENST00000604902 698 ntBASIC3.31□□□□□ -1.88
LBX1P52954 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
LBX1P52954 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.31□□□□□ -1.88
LBX1P52954 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.31□□□□□ -1.88
LBX1P52954 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LBX1P52954 AC244517.1-201ENST00000606030 2086 ntBASIC3.31□□□□□ -1.88
LBX1P52954 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
LBX1P52954 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LBX1P52954 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.3□□□□□ -1.88
LBX1P52954 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.3□□□□□ -1.88
LBX1P52954 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LBX1P52954 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LBX1P52954 SNORA31-201ENST00000362607 130 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNA5SP258-201ENST00000362750 119 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNU6-289P-201ENST00000364093 107 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNVU1-3-201ENST00000364313 161 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNU6-744P-201ENST00000365557 107 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNU6-1316P-201ENST00000384242 108 ntBASIC3.3□□□□□ -1.88
LBX1P52954 RNU4-53P-201ENST00000410828 140 ntBASIC3.3□□□□□ -1.88
LBX1P52954 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.3□□□□□ -1.88
LBX1P52954 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.3□□□□□ -1.88
LBX1P52954 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.3□□□□□ -1.88
LBX1P52954 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.3□□□□□ -1.88
LBX1P52954 EPS15P1-201ENST00000448836 336 ntBASIC3.3□□□□□ -1.88
LBX1P52954 AL353705.4-201ENST00000449661 238 ntBASIC3.3□□□□□ -1.88
LBX1P52954 MTCO3P16-201ENST00000454456 754 ntBASIC3.3□□□□□ -1.88
LBX1P52954 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
LBX1P52954 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
LBX1P52954 AL024509.2-201ENST00000493462 493 ntBASIC3.3□□□□□ -1.88
LBX1P52954 AC023424.2-201ENST00000493479 777 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms