Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
PDX1P52945 VN1R17P-201ENST00000472048 1090 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC108860.1-201ENST00000484521 383 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.22□□□□□ -1.89
PDX1P52945 MTND4P2-201ENST00000507767 1203 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.22□□□□□ -1.89
PDX1P52945 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.22□□□□□ -1.89
PDX1P52945 ARL2BPP6-201ENST00000512757 439 ntBASIC3.22□□□□□ -1.89
PDX1P52945 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.22□□□□□ -1.89
PDX1P52945 RNA5SP341-201ENST00000516261 117 ntBASIC3.22□□□□□ -1.89
PDX1P52945 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC090136.1-201ENST00000520009 240 ntBASIC3.22□□□□□ -1.89
PDX1P52945 NDUFB9P3-201ENST00000521269 501 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC107934.1-201ENST00000522215 217 ntBASIC3.22□□□□□ -1.89
PDX1P52945 DEFB108D-201ENST00000527787 222 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AP000873.5-201ENST00000533906 236 ntBASIC3.22□□□□□ -1.89
PDX1P52945 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDX1P52945 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.22□□□□□ -1.89
PDX1P52945 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.22□□□□□ -1.89
PDX1P52945 MED28P6-201ENST00000558776 231 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.22□□□□□ -1.89
PDX1P52945 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.22□□□□□ -1.89
PDX1P52945 AC068790.3-201ENST00000602988 553 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC015871.2-201ENST00000603605 948 ntBASIC3.22□□□□□ -1.89
PDX1P52945 SEPT7P9-203ENST00000604116 343 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC087752.4-201ENST00000605911 462 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC004067.1-201ENST00000608733 700 ntBASIC3.22□□□□□ -1.89
PDX1P52945 BX664608.1-201ENST00000610519 487 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC131902.3-201ENST00000611767 581 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AL355810.1-201ENST00000614629 552 ntBASIC3.22□□□□□ -1.89
PDX1P52945 MIR6852-201ENST00000621699 66 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC009268.2-201ENST00000621925 457 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC005858.4-201ENST00000623191 700 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AC091953.2-201ENST00000623979 160 ntBASIC3.22□□□□□ -1.89
PDX1P52945 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.22□□□□□ -1.89
PDX1P52945 GABPAP-201ENST00000419271 1356 ntBASIC3.22□□□□□ -1.89
PDX1P52945 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PDX1P52945 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PDX1P52945 TEX21P-201ENST00000447107 1476 ntBASIC3.22□□□□□ -1.89
PDX1P52945 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.89
PDX1P52945 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.21□□□□□ -1.9
PDX1P52945 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 RNU5A-8P-201ENST00000364102 114 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDX1P52945 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 RNU6-348P-201ENST00000384386 107 ntBASIC3.21□□□□□ -1.9
PDX1P52945 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
PDX1P52945 RNU6-248P-201ENST00000410720 107 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 AC006028.1-201ENST00000438379 402 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 MTCO2P18-201ENST00000457151 658 ntBASIC3.21□□□□□ -1.9
PDX1P52945 CEACAMP4-201ENST00000457676 421 ntBASIC3.21□□□□□ -1.9
PDX1P52945 RAP1BP2-201ENST00000478270 544 ntBASIC3.21□□□□□ -1.9
PDX1P52945 RPS3AP14-201ENST00000483907 780 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC011825.1-201ENST00000484967 388 ntBASIC3.21□□□□□ -1.9
PDX1P52945 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AP003467.2-201ENST00000520175 319 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AP002453.2-201ENST00000533503 320 ntBASIC3.21□□□□□ -1.9
PDX1P52945 RPL21P5-201ENST00000554662 472 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.21□□□□□ -1.9
PDX1P52945 COX6CP3-201ENST00000580869 223 ntBASIC3.21□□□□□ -1.9
PDX1P52945 MIR3611-201ENST00000584484 83 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 AC040904.1-201ENST00000590850 223 ntBASIC3.21□□□□□ -1.9
PDX1P52945 BNIP3P8-201ENST00000597863 560 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC007038.2-201ENST00000608095 740 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC008250.2-201ENST00000615261 205 ntBASIC3.21□□□□□ -1.9
PDX1P52945 AC010149.2-201ENST00000637608 315 ntBASIC3.21□□□□□ -1.9
PDX1P52945 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDX1P52945 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PDX1P52945 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PDX1P52945 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PDX1P52945 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PDX1P52945 RNY4P16-201ENST00000364768 94 ntBASIC3.2□□□□□ -1.9
PDX1P52945 SNORD6-201ENST00000365444 73 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 RNU1-39P-201ENST00000383897 165 ntBASIC3.2□□□□□ -1.9
PDX1P52945 RNU6-432P-201ENST00000384196 109 ntBASIC3.2□□□□□ -1.9
PDX1P52945 HSPE1P26-201ENST00000405341 275 ntBASIC3.2□□□□□ -1.9
PDX1P52945 FCF1P10-201ENST00000407590 479 ntBASIC3.2□□□□□ -1.9
PDX1P52945 MIR1289-1-201ENST00000408836 144 ntBASIC3.2□□□□□ -1.9
PDX1P52945 Z99755.1-201ENST00000414048 380 ntBASIC3.2□□□□□ -1.9
PDX1P52945 RPL21P32-201ENST00000419877 477 ntBASIC3.2□□□□□ -1.9
PDX1P52945 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 AL589823.1-201ENST00000429577 183 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms