Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MTND4P13-201ENST00000402078 1023 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
GPC3P51654 TPMTP3-201ENST00000411928 735 ntBASIC3.07□□□□□ -1.92
GPC3P51654 Z85995.1-201ENST00000415547 335 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL513477.1-202ENST00000417061 214 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 MTND2P9-201ENST00000422293 931 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC3P51654 AC019097.1-201ENST00000424783 735 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AC063976.3-201ENST00000426849 329 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL390023.1-201ENST00000428836 262 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AC084290.1-201ENST00000434995 374 ntBASIC3.07□□□□□ -1.92
GPC3P51654 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 SNORD109B-201ENST00000458961 67 ntBASIC3.07□□□□□ -1.92
GPC3P51654 SNORD109A-201ENST00000459128 67 ntBASIC3.07□□□□□ -1.92
GPC3P51654 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.07□□□□□ -1.92
GPC3P51654 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC3P51654 MTCO1P47-201ENST00000523889 1271 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 OR6C7P-201ENST00000547875 934 ntBASIC3.07□□□□□ -1.92
GPC3P51654 SETP2-201ENST00000553886 926 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC3P51654 AL512347.1-201ENST00000566420 503 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AP001269.3-201ENST00000588718 329 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.07□□□□□ -1.92
GPC3P51654 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC3P51654 AC010620.2-201ENST00000600135 313 ntBASIC3.07□□□□□ -1.92
GPC3P51654 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.07□□□□□ -1.92
GPC3P51654 AC106052.1-201ENST00000608029 497 ntBASIC3.07□□□□□ -1.92
GPC3P51654 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
GPC3P51654 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GPC3P51654 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.07□□□□□ -1.92
GPC3P51654 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC3P51654 RNU6-359P-201ENST00000365466 108 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNU6-906P-201ENST00000384700 70 ntBASIC3.06□□□□□ -1.92
GPC3P51654 MIR325-201ENST00000385260 98 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
GPC3P51654 ERHP2-201ENST00000402323 299 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AL592114.1-201ENST00000403842 483 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNU2-52P-201ENST00000410680 190 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNU6-193P-201ENST00000410977 107 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNU4-22P-201ENST00000411058 166 ntBASIC3.06□□□□□ -1.92
GPC3P51654 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.06□□□□□ -1.92
GPC3P51654 OR4K11P-201ENST00000431829 904 ntBASIC3.06□□□□□ -1.92
GPC3P51654 MTND1P9-201ENST00000453775 944 ntBASIC3.06□□□□□ -1.92
GPC3P51654 BX322784.1-201ENST00000455793 1077 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RPL21P93-201ENST00000480465 489 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC233702.1-201ENST00000482905 502 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
GPC3P51654 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.06□□□□□ -1.92
GPC3P51654 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
GPC3P51654 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.06□□□□□ -1.92
GPC3P51654 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC092593.1-201ENST00000515413 1815 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNU6-714P-201ENST00000516963 103 ntBASIC3.06□□□□□ -1.92
GPC3P51654 RNA5SP291-201ENST00000517222 105 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC3P51654 HMGN1P28-201ENST00000521340 364 ntBASIC3.06□□□□□ -1.92
GPC3P51654 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
GPC3P51654 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.06□□□□□ -1.92
GPC3P51654 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.06□□□□□ -1.92
GPC3P51654 HPRT1P3-201ENST00000539521 576 ntBASIC3.06□□□□□ -1.92
GPC3P51654 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.06□□□□□ -1.92
GPC3P51654 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.06□□□□□ -1.92
GPC3P51654 AC007785.2-201ENST00000598627 1916 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC091057.2-201ENST00000602594 792 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
GPC3P51654 AC069234.5-201ENST00000611056 416 ntBASIC3.06□□□□□ -1.92
GPC3P51654 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.06□□□□□ -1.92
GPC3P51654 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GPC3P51654 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
GPC3P51654 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
GPC3P51654 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
GPC3P51654 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
GPC3P51654 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
GPC3P51654 SNORD56.5-201ENST00000364281 72 ntBASIC3.05□□□□□ -1.92
GPC3P51654 RNU6-636P-201ENST00000384598 107 ntBASIC3.05□□□□□ -1.92
GPC3P51654 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
GPC3P51654 MIR9-1-201ENST00000385198 89 ntBASIC3.05□□□□□ -1.92
GPC3P51654 MIR181B1-201ENST00000385240 110 ntBASIC3.05□□□□□ -1.92
GPC3P51654 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GPC3P51654 RNA5SP21-201ENST00000410917 96 ntBASIC3.05□□□□□ -1.92
GPC3P51654 USP9YP11-201ENST00000427537 717 ntBASIC3.05□□□□□ -1.92
GPC3P51654 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.05□□□□□ -1.92
GPC3P51654 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.05□□□□□ -1.92
GPC3P51654 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
GPC3P51654 AL606517.1-201ENST00000446914 387 ntBASIC3.05□□□□□ -1.92
GPC3P51654 OR6K1P-201ENST00000456766 971 ntBASIC3.05□□□□□ -1.92
GPC3P51654 SNORD121B-201ENST00000458838 81 ntBASIC3.05□□□□□ -1.92
GPC3P51654 RNU7-23P-201ENST00000459465 62 ntBASIC3.05□□□□□ -1.92
GPC3P51654 AC005410.1-202ENST00000460347 485 ntBASIC3.05□□□□□ -1.92
GPC3P51654 RPL31P50-201ENST00000471002 296 ntBASIC3.05□□□□□ -1.92
GPC3P51654 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.05□□□□□ -1.92
GPC3P51654 AC104563.1-201ENST00000476147 376 ntBASIC3.05□□□□□ -1.92
GPC3P51654 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.05□□□□□ -1.92
GPC3P51654 AC109445.1-201ENST00000512356 383 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms