Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF144AP50876 RPS20P1-201ENST00000434853 354 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 EEF1B2P6-201ENST00000445713 673 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 HIGD1AP2-201ENST00000446367 280 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 KNOP1P3-201ENST00000446933 426 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF144AP50876 Y_RNA.638-201ENST00000459374 113 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 SNORD125-201ENST00000459538 96 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 RN7SL189P-201ENST00000468631 289 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 RNA5SP271-201ENST00000516700 88 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF144AP50876 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF144AP50876 H3F3AP1-201ENST00000559984 334 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF144AP50876 AC090617.3-201ENST00000573670 475 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF144AP50876 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC011921.3-201ENST00000605540 361 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 SNORD113-5-201ENST00000607261 78 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC108706.1-201ENST00000611053 297 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 AC090607.5-201ENST00000615692 224 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 MIR6133-201ENST00000617057 108 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF144AP50876 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF144AP50876 ABCC13-202ENST00000463099 3842 ntBASIC5.2□□□□□ -1.58
RNF144AP50876 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF144AP50876 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF144AP50876 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 AP001029.2-203ENST00000589795 4910 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF144AP50876 Y_RNA.33-201ENST00000362591 102 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 RN7SKP69-201ENST00000365390 305 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 SNORA22C-201ENST00000384614 134 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNF144AP50876 HMGN1P20-201ENST00000411849 300 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 AC023141.9-201ENST00000458734 412 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 AC108161.1-201ENST00000461060 402 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 AC018638.3-201ENST00000461273 132 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 PPIAP21-201ENST00000464473 501 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 RPL23AP45-201ENST00000476406 468 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 SNORA31.22-201ENST00000517204 135 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF144AP50876 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF144AP50876 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF144AP50876 MIR4310-201ENST00000582950 57 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 MIR4260-201ENST00000583107 67 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 RN7SL544P-201ENST00000617232 284 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 MIR6861-201ENST00000618657 64 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RNF144AP50876 RN7SL763P-201ENST00000620922 284 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 AC091895.1-201ENST00000624494 256 ntBASIC5.19□□□□□ -1.58
RNF144AP50876 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF144AP50876 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
RNF144AP50876 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF144AP50876 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF144AP50876 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RNF144AP50876 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF144AP50876 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF144AP50876 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RNF144AP50876 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RNF144AP50876 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF144AP50876 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF144AP50876 RNA5SP52-201ENST00000362448 134 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNU6-1301P-201ENST00000362724 104 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RN7SKP145-201ENST00000363291 303 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNU6-512P-201ENST00000364438 103 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNU6-384P-201ENST00000364900 104 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNA5SP30-201ENST00000365552 115 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNU6-76P-201ENST00000384060 104 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RNU6-926P-201ENST00000384075 107 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 Y_RNA.497-201ENST00000384447 98 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 Y_RNA.569-201ENST00000384749 103 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RNF144AP50876 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF144AP50876 GPS2P1-201ENST00000411761 986 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 AC079809.1-201ENST00000415468 276 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF144AP50876 AL358453.1-201ENST00000422522 250 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 AL662874.1-201ENST00000426065 230 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF144AP50876 TMEM183AP1-205ENST00000432739 290 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RPL12P11-201ENST00000439970 501 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF144AP50876 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF144AP50876 RPL37P6-202ENST00000464216 403 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RPS26P21-201ENST00000475397 348 ntBASIC5.18□□□□□ -1.58
RNF144AP50876 RN7SL799P-201ENST00000475891 298 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms