Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 HMGN1P11-201ENST00000508668 303 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 NDUFB4P2-201ENST00000509515 391 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC9A3P48764 SNORA70.18-201ENST00000516696 98 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 RNU2-46P-201ENST00000517038 113 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AC006362.1-201ENST00000567392 174 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 AC005771.1-201ENST00000585581 349 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 AC015871.2-201ENST00000603605 948 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 AC090582.1-201ENST00000636321 199 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
SLC9A3P48764 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.18□□□□□ -1.9
SLC9A3P48764 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC9A3P48764 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SLC9A3P48764 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC9A3P48764 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SLC9A3P48764 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SLC9A3P48764 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SLC9A3P48764 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
SLC9A3P48764 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC9A3P48764 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 ZNF807-201ENST00000328088 1707 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC093908.1-201ENST00000623125 8092 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 OR1S2-201ENST00000302592 978 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SLC9A3P48764 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SLC9A3P48764 RNY4P34-201ENST00000364779 95 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SLC9A3P48764 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 SNORA57.1-201ENST00000391227 145 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 RN7SKP140-201ENST00000411196 284 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 ELOCP17-201ENST00000414751 326 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC007283.2-201ENST00000424739 197 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AL031667.1-201ENST00000440222 725 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 MTND6P13-201ENST00000443510 523 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC9A3P48764 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SLC9A3P48764 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC010587.1-201ENST00000505809 469 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC9A3P48764 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.17□□□□□ -1.9
SLC9A3P48764 AC022447.1-201ENST00000515358 464 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 RNU6-1256P-201ENST00000516539 103 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AP002453.2-201ENST00000533503 320 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.17□□□□□ -1.9
SLC9A3P48764 AL355836.1-201ENST00000555951 870 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 NBR2-204ENST00000587322 63 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC040904.1-201ENST00000590850 223 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.17□□□□□ -1.9
SLC9A3P48764 VN1R85P-201ENST00000601587 426 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AL606834.2-201ENST00000602954 668 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC087752.4-201ENST00000605911 462 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC245008.1-201ENST00000608123 476 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC103710.1-201ENST00000610003 901 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC091304.9-201ENST00000612091 226 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 MIR4275-201ENST00000636486 87 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AP003399.1-201ENST00000637534 361 ntBASIC3.17□□□□□ -1.9
SLC9A3P48764 AC008568.2-201ENST00000623862 2313 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC9A3P48764 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC9A3P48764 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SLC9A3P48764 FRG1CP-201ENST00000358464 769 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 SNORD9-201ENST00000362566 104 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 U8.3-201ENST00000363321 132 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 RNU4-1-201ENST00000363925 141 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 RNA5SP51-201ENST00000364750 119 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 MRPL42P2-201ENST00000403169 426 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AL354719.1-201ENST00000406535 843 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 RNU6-195P-201ENST00000411352 109 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 HMGB3P23-201ENST00000414981 585 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 DBIP2-201ENST00000419076 262 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 BX842559.1-201ENST00000419615 532 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 MTCO2P34-201ENST00000421994 607 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.16□□□□□ -1.9
SLC9A3P48764 AC092573.2-201ENST00000434546 243 ntBASIC3.16□□□□□ -1.9
SLC9A3P48764 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC9A3P48764 KATNBL1P3-201ENST00000443475 909 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms