Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-1095P-201ENST00000516148 108 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 SNRPGP16-201ENST00000533275 226 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 HSPE1P20-201ENST00000538133 289 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 HIGD1AP17-201ENST00000554576 276 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AL132657.2-201ENST00000564417 358 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL12P48061 MIR4637-201ENST00000582405 84 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC091057.2-201ENST00000602594 792 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC091057.3-201ENST00000602684 733 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC069304.2-201ENST00000605154 435 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.36□□□□□ -2.03
CXCL12P48061 AC069234.5-201ENST00000611056 416 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AL355810.1-201ENST00000614629 552 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CXCL12P48061 AL360181.4-201ENST00000621752 134 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 AC090897.3-201ENST00000636973 1157 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
CXCL12P48061 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL12P48061 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 DHFRP6-201ENST00000401776 268 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 MTND4P13-201ENST00000402078 1023 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 RNU2-47P-201ENST00000410649 186 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 RNA5SP492-201ENST00000411330 114 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL12P48061 AC099677.1-201ENST00000420575 175 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 RPL7P30-201ENST00000420888 709 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 MTCO2P17-201ENST00000424336 677 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 RPL23AP74-201ENST00000437246 471 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 RPL23AP58-201ENST00000440453 469 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 OR10R1P-201ENST00000441524 1141 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 MRPL50P4-201ENST00000446432 475 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL12P48061 OFD1P3Y-201ENST00000453312 783 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 AC068587.2-201ENST00000478386 781 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 RPL23AP70-201ENST00000483361 460 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 CKS1BP2-201ENST00000497342 240 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.35□□□□□ -2.03
CXCL12P48061 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL12P48061 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL12P48061 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 OR10V3P-201ENST00000525712 725 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.35□□□□□ -2.03
CXCL12P48061 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 SLC2A13P1-201ENST00000531560 322 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC018630.1-201ENST00000541376 925 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 MTCYBP23-201ENST00000558717 1102 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AADACP1-206ENST00000561502 1193 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 AC025281.1-201ENST00000567026 265 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 FAM60BP-201ENST00000578364 658 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL12P48061 AC009977.1-201ENST00000586015 570 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC025811.1-201ENST00000604312 472 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AL139022.2-201ENST00000606934 443 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC004009.2-201ENST00000623016 728 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC095031.1-201ENST00000623685 672 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AP003122.6-201ENST00000623831 495 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 AC099654.9-201ENST00000637055 678 ntBASIC2.35□□□□□ -2.03
CXCL12P48061 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL12P48061 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CXCL12P48061 SNORD56.5-201ENST00000364281 72 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 RNU6-1027P-201ENST00000383998 107 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 RNU6-76P-201ENST00000384060 104 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL590084.1-201ENST00000407885 387 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 RN7SKP32-201ENST00000410167 303 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 RNU4-22P-201ENST00000411058 166 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 SSXP9-201ENST00000417503 292 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 UBE2D3P2-201ENST00000424409 445 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC007742.1-201ENST00000425789 329 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL390023.1-201ENST00000428836 262 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL590233.1-201ENST00000430017 456 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 MTND2P5-201ENST00000432656 1006 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 HSFY7P-201ENST00000432672 318 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL12P48061 ELOCP26-201ENST00000436067 329 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 HSFY8P-201ENST00000437934 318 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 MTND2P20-201ENST00000440805 661 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL12P48061 RPL39P40-201ENST00000445481 146 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 HSFY5P-201ENST00000453726 309 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 Z82190.1-201ENST00000454534 490 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 HMGN2P23-201ENST00000456759 269 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC023424.2-201ENST00000493479 777 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 COX7A2P2-201ENST00000505291 250 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL12P48061 MLLT10P2-201ENST00000506434 249 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.34□□□□□ -2.03
CXCL12P48061 SNORA31.1-201ENST00000515993 133 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 SNORA31.5-201ENST00000516190 133 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 RNY4P37-201ENST00000516225 96 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL12P48061 AC005832.3-201ENST00000537929 631 ntBASIC2.34□□□□□ -2.03
CXCL12P48061 AC123904.3-201ENST00000547218 814 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms