Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 RPL7P26-201ENST00000333817 754 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU5E-1-201ENST00000362477 120 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 U3.11-201ENST00000364476 212 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU6-169P-201ENST00000365336 107 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU6-108P-201ENST00000365558 107 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 Y_RNA.516-201ENST00000384541 124 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NKX2-1P43699 RPS3AP36-201ENST00000398190 775 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AL359634.1-202ENST00000404721 284 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 FAT1P1-201ENST00000406588 507 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU6-55P-201ENST00000411092 107 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU6-954P-201ENST00000411355 107 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC016397.1-201ENST00000412463 242 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 FCF1P9-201ENST00000412546 282 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC245054.1-201ENST00000420944 258 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-1P43699 TBCAP1-201ENST00000436520 327 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 HMGN2P20-201ENST00000437531 273 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC079448.1-201ENST00000449377 373 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 PSPHP1-201ENST00000450062 261 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 SSXP4-201ENST00000451349 245 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 SRRM1P2-201ENST00000464531 1192 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RPL31P60-201ENST00000478450 367 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RPS4XP22-201ENST00000480755 780 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 FCF1P3-201ENST00000496394 590 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 RNU6-506P-201ENST00000516553 94 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-1P43699 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-1P43699 MRPL49P2-201ENST00000521066 465 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 NDUFB9P3-201ENST00000521269 501 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC011979.2-201ENST00000527568 352 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC123904.3-201ENST00000547218 814 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX2-1P43699 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.01□□□□□ -1.93
NKX2-1P43699 MIR4293-201ENST00000584305 78 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 DEFB131E-202ENST00000602581 683 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 SNORA62.6-201ENST00000606322 83 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 MIR6748-201ENST00000610433 71 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC092794.1-201ENST00000612734 582 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC004696.1-201ENST00000614345 607 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AL138880.2-201ENST00000616214 239 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC002076.2-201ENST00000617362 122 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NKX2-1P43699 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC079684.1-201ENST00000621405 437 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX2-1P43699 OR52H1-202ENST00000641796 1061 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 AC022336.2-201ENST00000568966 2538 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX2-1P43699 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 MFSD8-236ENST00000641509 4050 ntBASIC3.01□□□□□ -1.93
NKX2-1P43699 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NKX2-1P43699 AC007256.1-201ENST00000392253 2765 ntBASIC3□□□□□ -1.93
NKX2-1P43699 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 HSPE1P11-201ENST00000339579 310 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RNY4P34-201ENST00000364779 95 ntBASIC3□□□□□ -1.93
NKX2-1P43699 RNY3P13-201ENST00000365542 102 ntBASIC3□□□□□ -1.93
NKX2-1P43699 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3□□□□□ -1.93
NKX2-1P43699 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3□□□□□ -1.93
NKX2-1P43699 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 UBE2V1P10-201ENST00000414685 269 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 MTCO1P21-201ENST00000416634 589 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 ISCA1P1-201ENST00000426679 387 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC133104.1-201ENST00000429100 218 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC104850.1-201ENST00000435940 476 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3□□□□□ -1.93
NKX2-1P43699 NANOGNBP1-201ENST00000448444 480 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 FGF7P6-202ENST00000451282 293 ntBASIC3□□□□□ -1.93
NKX2-1P43699 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3□□□□□ -1.93
NKX2-1P43699 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3□□□□□ -1.93
NKX2-1P43699 SNORD97-201ENST00000459187 142 ntBASIC3□□□□□ -1.93
NKX2-1P43699 AC010618.1-201ENST00000469924 477 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms