Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RPL21P132-201ENST00000331267 462 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 SNORA9.2-201ENST00000365361 133 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 RNY3P9-201ENST00000384727 106 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 MIR184-201ENST00000384962 84 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 RNA5SP184-201ENST00000411071 108 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 RNU6-516P-201ENST00000411381 104 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC018630.2-202ENST00000422992 927 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC092573.2-201ENST00000434546 243 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AP000542.1-201ENST00000448473 371 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 RN7SL330P-201ENST00000469709 307 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC106872.3-201ENST00000495104 446 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 RNU6-840P-201ENST00000517275 65 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC008015.1-201ENST00000555505 465 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC002400.1-201ENST00000569310 726 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC008121.2-201ENST00000614647 523 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AL138880.2-201ENST00000616214 239 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 AC027309.3-201ENST00000623419 351 ntBASIC2.98□□□□□ -1.93
TNFRSF4P43489 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TNFRSF4P43489 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.98□□□□□ -1.93
TNFRSF4P43489 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TNFRSF4P43489 TPTE2P4-201ENST00000258589 1605 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 RPS4XP5-202ENST00000449995 1334 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TNFRSF4P43489 U3.11-201ENST00000364476 212 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 RNA5SP88-201ENST00000365560 109 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL049545.1-201ENST00000401856 572 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC008850.1-201ENST00000427546 362 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL133217.1-201ENST00000450980 425 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC006539.3-201ENST00000454258 129 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 RNU7-125P-201ENST00000458760 62 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 RPL30P5-201ENST00000494923 336 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 RN7SKP132-201ENST00000516001 208 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 RNU6-798P-201ENST00000516912 103 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 RPL23AP84-201ENST00000571193 464 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC136618.2-201ENST00000575091 400 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 MIR4999-201ENST00000585029 91 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 ATP1B3P1-201ENST00000605365 821 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC018638.7-201ENST00000605836 1114 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL360219.1-201ENST00000610230 366 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL592295.2-201ENST00000612578 206 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AL603758.1-201ENST00000618654 241 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC078883.4-201ENST00000623218 367 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 AP000676.3-201ENST00000623299 569 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TNFRSF4P43489 AC009902.3-201ENST00000606235 2172 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.97□□□□□ -1.93
TNFRSF4P43489 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.96□□□□□ -1.93
TNFRSF4P43489 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.96□□□□□ -1.93
TNFRSF4P43489 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TNFRSF4P43489 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 Y_RNA.18-201ENST00000362461 102 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 RNU6-432P-201ENST00000384196 109 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 MIR514A1-201ENST00000385133 98 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 RN7SKP285-201ENST00000410137 318 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 RHEBP3-201ENST00000411920 351 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 NDUFB4P7-201ENST00000423198 363 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 AC087499.2-201ENST00000432861 149 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 RPL35AP22-201ENST00000436855 335 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 AC009237.8-201ENST00000445492 379 ntBASIC2.96□□□□□ -1.94
TNFRSF4P43489 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.96□□□□□ -1.94
TNFRSF4P43489 RPL21P8-201ENST00000465083 535 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms