Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SUMO2P2-201ENST00000456482 255 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
RPA3P35244 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPA3P35244 AC087588.1-201ENST00000462203 316 ntBASIC2.21□□□□□ -2.06
RPA3P35244 KLRA1P-201ENST00000503499 986 ntBASIC2.21□□□□□ -2.06
RPA3P35244 RNA5SP471-201ENST00000516971 106 ntBASIC2.21□□□□□ -2.06
RPA3P35244 SNORA31.22-201ENST00000517204 135 ntBASIC2.21□□□□□ -2.06
RPA3P35244 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.21□□□□□ -2.06
RPA3P35244 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.21□□□□□ -2.06
RPA3P35244 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.21□□□□□ -2.06
RPA3P35244 AP003066.2-201ENST00000529375 555 ntBASIC2.21□□□□□ -2.06
RPA3P35244 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPA3P35244 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.21□□□□□ -2.06
RPA3P35244 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.21□□□□□ -2.06
RPA3P35244 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.21□□□□□ -2.06
RPA3P35244 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.21□□□□□ -2.06
RPA3P35244 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPA3P35244 AC107294.1-201ENST00000609524 467 ntBASIC2.21□□□□□ -2.06
RPA3P35244 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPA3P35244 AL354696.1-201ENST00000614652 497 ntBASIC2.21□□□□□ -2.06
RPA3P35244 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.21□□□□□ -2.06
RPA3P35244 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
RPA3P35244 Z99496.1-201ENST00000469424 1477 ntBASIC2.2□□□□□ -2.06
RPA3P35244 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RPA3P35244 HMGB1P5-201ENST00000255320 642 ntBASIC2.2□□□□□ -2.06
RPA3P35244 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPA3P35244 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
RPA3P35244 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPA3P35244 RNU6-76P-201ENST00000384060 104 ntBASIC2.2□□□□□ -2.06
RPA3P35244 RNU6-1300P-201ENST00000391046 108 ntBASIC2.2□□□□□ -2.06
RPA3P35244 SNRPEP2-201ENST00000397592 279 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AL513475.1-201ENST00000406602 315 ntBASIC2.2□□□□□ -2.06
RPA3P35244 PTGES3P2-201ENST00000407942 482 ntBASIC2.2□□□□□ -2.06
RPA3P35244 Z85995.1-201ENST00000415547 335 ntBASIC2.2□□□□□ -2.06
RPA3P35244 SPA17P1-201ENST00000416656 452 ntBASIC2.2□□□□□ -2.06
RPA3P35244 NDUFB4P7-201ENST00000423198 363 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AL590233.1-201ENST00000430017 456 ntBASIC2.2□□□□□ -2.06
RPA3P35244 DPPA3P1-201ENST00000448050 469 ntBASIC2.2□□□□□ -2.06
RPA3P35244 RPS15AP27-201ENST00000449183 343 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.2□□□□□ -2.06
RPA3P35244 RNU7-23P-201ENST00000459465 62 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.2□□□□□ -2.06
RPA3P35244 AC078857.1-201ENST00000469870 667 ntBASIC2.2□□□□□ -2.06
RPA3P35244 EIF4EP3-201ENST00000498782 656 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AC008413.1-201ENST00000511864 177 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AC009163.5-201ENST00000575421 637 ntBASIC2.2□□□□□ -2.06
RPA3P35244 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
RPA3P35244 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
RPA3P35244 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.2□□□□□ -2.06
RPA3P35244 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.2□□□□□ -2.06
RPA3P35244 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
RPA3P35244 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.2□□□□□ -2.06
RPA3P35244 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RPA3P35244 AL022578.1-201ENST00000439330 1433 ntBASIC2.19□□□□□ -2.06
RPA3P35244 OR4G2P-202ENST00000641004 1759 ntBASIC2.19□□□□□ -2.06
RPA3P35244 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPA3P35244 XGY1-201ENST00000381172 446 ntBASIC2.19□□□□□ -2.06
RPA3P35244 RNU6-1072P-201ENST00000384703 107 ntBASIC2.19□□□□□ -2.06
RPA3P35244 RNU6-443P-201ENST00000384780 107 ntBASIC2.19□□□□□ -2.06
RPA3P35244 MCTS2P-201ENST00000394552 546 ntBASIC2.19□□□□□ -2.06
RPA3P35244 RPL22P22-201ENST00000395439 379 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.19□□□□□ -2.06
RPA3P35244 LUZP4P1-201ENST00000415420 344 ntBASIC2.19□□□□□ -2.06
RPA3P35244 GTF2IP20-201ENST00000431663 360 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.19□□□□□ -2.06
RPA3P35244 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.19□□□□□ -2.06
RPA3P35244 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
RPA3P35244 MRPL42P4-201ENST00000453267 443 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AC090096.1-201ENST00000489168 390 ntBASIC2.19□□□□□ -2.06
RPA3P35244 RPL23AP49-201ENST00000492925 468 ntBASIC2.19□□□□□ -2.06
RPA3P35244 MTCYBP17-201ENST00000503579 789 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.19□□□□□ -2.06
RPA3P35244 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.19□□□□□ -2.06
RPA3P35244 RNU6-1256P-201ENST00000516539 103 ntBASIC2.19□□□□□ -2.06
RPA3P35244 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPA3P35244 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.19□□□□□ -2.06
RPA3P35244 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.19□□□□□ -2.06
RPA3P35244 LRRC37A5P-203ENST00000580181 585 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.19□□□□□ -2.06
RPA3P35244 AC079395.3-201ENST00000615161 484 ntBASIC2.19□□□□□ -2.06
RPA3P35244 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 AC010149.2-201ENST00000637608 315 ntBASIC2.19□□□□□ -2.06
RPA3P35244 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.19□□□□□ -2.06
RPA3P35244 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPA3P35244 MTCO1P4-201ENST00000520516 1409 ntBASIC2.18□□□□□ -2.06
RPA3P35244 AC006020.1-201ENST00000420179 1854 ntBASIC2.18□□□□□ -2.06
RPA3P35244 RNU6-354P-201ENST00000383862 107 ntBASIC2.18□□□□□ -2.06
RPA3P35244 RNU1-73P-201ENST00000383971 164 ntBASIC2.18□□□□□ -2.06
RPA3P35244 RNU6-610P-201ENST00000384264 107 ntBASIC2.18□□□□□ -2.06
RPA3P35244 MIR514A1-201ENST00000385133 98 ntBASIC2.18□□□□□ -2.06
RPA3P35244 ANAPC10P1-201ENST00000395991 556 ntBASIC2.18□□□□□ -2.06
RPA3P35244 BTF3P7-201ENST00000407097 488 ntBASIC2.18□□□□□ -2.06
RPA3P35244 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPA3P35244 AL139413.1-201ENST00000421309 217 ntBASIC2.18□□□□□ -2.06
RPA3P35244 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms