Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AP003033.1-201ENST00000527244 415 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AL161722.3-201ENST00000605789 2983 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AP000676.4-201ENST00000624659 623 ntBASIC1.86□□□□□ -2.11
CPS1P31327 DDX43P2-201ENST00000604753 1354 ntBASIC1.85□□□□□ -2.11
CPS1P31327 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
CPS1P31327 SNORA67.1-201ENST00000364749 141 ntBASIC1.85□□□□□ -2.11
CPS1P31327 RNU1-52P-201ENST00000384190 164 ntBASIC1.85□□□□□ -2.11
CPS1P31327 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.85□□□□□ -2.11
CPS1P31327 ARL5AP3-201ENST00000439327 386 ntBASIC1.85□□□□□ -2.11
CPS1P31327 AL445687.1-201ENST00000439946 251 ntBASIC1.85□□□□□ -2.11
CPS1P31327 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.85□□□□□ -2.11
CPS1P31327 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.85□□□□□ -2.11
CPS1P31327 SNORD59.2-201ENST00000516873 68 ntBASIC1.85□□□□□ -2.11
CPS1P31327 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.85□□□□□ -2.11
CPS1P31327 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.85□□□□□ -2.11
CPS1P31327 AL109653.1-201ENST00000603091 248 ntBASIC1.85□□□□□ -2.11
CPS1P31327 AC006249.1-201ENST00000621223 471 ntBASIC1.85□□□□□ -2.11
CPS1P31327 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CPS1P31327 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.84□□□□□ -2.11
CPS1P31327 Y_RNA.251-201ENST00000364551 99 ntBASIC1.84□□□□□ -2.11
CPS1P31327 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CPS1P31327 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.84□□□□□ -2.11
CPS1P31327 AL445305.1-201ENST00000432577 575 ntBASIC1.84□□□□□ -2.11
CPS1P31327 UBE2V1P13-201ENST00000436983 439 ntBASIC1.84□□□□□ -2.11
CPS1P31327 RPL23AP41-201ENST00000484754 458 ntBASIC1.84□□□□□ -2.11
CPS1P31327 AC087808.1-201ENST00000520501 361 ntBASIC1.84□□□□□ -2.11
CPS1P31327 AC068338.1-201ENST00000565567 176 ntBASIC1.84□□□□□ -2.11
CPS1P31327 AC006329.2-201ENST00000611491 394 ntBASIC1.84□□□□□ -2.11
CPS1P31327 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CPS1P31327 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.83□□□□□ -2.12
CPS1P31327 AL031274.2-201ENST00000599419 203 ntBASIC1.83□□□□□ -2.12
CPS1P31327 HSPE1P14-201ENST00000605812 302 ntBASIC1.83□□□□□ -2.12
CPS1P31327 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
CPS1P31327 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.82□□□□□ -2.12
CPS1P31327 RNA5SP457-201ENST00000363657 124 ntBASIC1.82□□□□□ -2.12
CPS1P31327 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
CPS1P31327 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.82□□□□□ -2.12
CPS1P31327 IFNA20P-201ENST00000436840 528 ntBASIC1.82□□□□□ -2.12
CPS1P31327 PGBD4P3-201ENST00000440731 581 ntBASIC1.82□□□□□ -2.12
CPS1P31327 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.82□□□□□ -2.12
CPS1P31327 RPL21P104-201ENST00000464143 478 ntBASIC1.82□□□□□ -2.12
CPS1P31327 RPS23P3-201ENST00000470993 430 ntBASIC1.82□□□□□ -2.12
CPS1P31327 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.82□□□□□ -2.12
CPS1P31327 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.82□□□□□ -2.12
CPS1P31327 SUB1P1-201ENST00000524415 382 ntBASIC1.82□□□□□ -2.12
CPS1P31327 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.82□□□□□ -2.12
CPS1P31327 AC098657.3-201ENST00000620434 263 ntBASIC1.82□□□□□ -2.12
CPS1P31327 HMGN2P16-201ENST00000456802 261 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC022493.1-201ENST00000492984 337 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC087373.1-201ENST00000524920 491 ntBASIC1.81□□□□□ -2.12
CPS1P31327 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CPS1P31327 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.81□□□□□ -2.12
CPS1P31327 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CPS1P31327 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CPS1P31327 Y_RNA.68-201ENST00000362881 102 ntBASIC1.81□□□□□ -2.12
CPS1P31327 MIR216A-201ENST00000385063 110 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AL356057.2-201ENST00000403318 432 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.81□□□□□ -2.12
CPS1P31327 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.81□□□□□ -2.12
CPS1P31327 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.81□□□□□ -2.12
CPS1P31327 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.81□□□□□ -2.12
CPS1P31327 LSM1P1-201ENST00000438629 273 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.81□□□□□ -2.12
CPS1P31327 AC008837.2-201ENST00000513076 418 ntBASIC1.81□□□□□ -2.12
CPS1P31327 RNU6-113P-201ENST00000516653 101 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
CPS1P31327 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.81□□□□□ -2.12
CPS1P31327 AL356118.1-201ENST00000635272 1078 ntBASIC1.81□□□□□ -2.12
CPS1P31327 MTND5P10-201ENST00000603719 1809 ntBASIC1.8□□□□□ -2.12
CPS1P31327 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.8□□□□□ -2.12
CPS1P31327 AP002907.1-201ENST00000606361 1430 ntBASIC1.8□□□□□ -2.12
CPS1P31327 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CPS1P31327 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CPS1P31327 AC016769.3-201ENST00000396562 315 ntBASIC1.8□□□□□ -2.12
CPS1P31327 PRELID3BP11-201ENST00000414230 479 ntBASIC1.8□□□□□ -2.12
CPS1P31327 AIMP1P2-201ENST00000425294 312 ntBASIC1.8□□□□□ -2.12
CPS1P31327 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.8□□□□□ -2.12
CPS1P31327 MTND2P2-201ENST00000434633 945 ntBASIC1.8□□□□□ -2.12
CPS1P31327 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.8□□□□□ -2.12
CPS1P31327 AL136380.1-201ENST00000447970 162 ntBASIC1.8□□□□□ -2.12
CPS1P31327 ARL2BPP4-201ENST00000506854 471 ntBASIC1.8□□□□□ -2.12
CPS1P31327 HMGB3P3-201ENST00000510526 400 ntBASIC1.8□□□□□ -2.12
CPS1P31327 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.8□□□□□ -2.12
CPS1P31327 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.8□□□□□ -2.12
CPS1P31327 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
CPS1P31327 CBX3P2-202ENST00000583365 535 ntBASIC1.8□□□□□ -2.12
CPS1P31327 AL449363.1-201ENST00000617815 186 ntBASIC1.8□□□□□ -2.12
CPS1P31327 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CPS1P31327 SNORA18.2-201ENST00000383865 132 ntBASIC1.79□□□□□ -2.12
CPS1P31327 AC114801.2-201ENST00000503825 781 ntBASIC1.79□□□□□ -2.12
CPS1P31327 RN7SKP265-201ENST00000516448 223 ntBASIC1.79□□□□□ -2.12
CPS1P31327 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.79□□□□□ -2.12
CPS1P31327 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.79□□□□□ -2.12
CPS1P31327 AC023825.1-201ENST00000566704 1030 ntBASIC1.79□□□□□ -2.12
CPS1P31327 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.79□□□□□ -2.12
CPS1P31327 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.79□□□□□ -2.12
CPS1P31327 PABPC1P7-201ENST00000413177 1513 ntBASIC1.78□□□□□ -2.12
CPS1P31327 RNU6-203P-201ENST00000384038 104 ntBASIC1.78□□□□□ -2.12
CPS1P31327 RNU2-25P-201ENST00000411041 191 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms