Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.49□□□□□ -1.53
RXRBP28702 RN7SKP24-201ENST00000515888 284 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU6-566P-201ENST00000516790 107 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU6-352P-201ENST00000516908 107 ntBASIC5.49□□□□□ -1.53
RXRBP28702 RNU6-273P-201ENST00000516937 96 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AP005902.1-201ENST00000521358 186 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AP000857.1-201ENST00000532151 543 ntBASIC5.49□□□□□ -1.53
RXRBP28702 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.49□□□□□ -1.53
RXRBP28702 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.49□□□□□ -1.53
RXRBP28702 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.49□□□□□ -1.53
RXRBP28702 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.49□□□□□ -1.53
RXRBP28702 AC005344.1-201ENST00000613391 459 ntBASIC5.49□□□□□ -1.53
RXRBP28702 uc_338.11-201ENST00000619132 160 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AC098657.3-201ENST00000620434 263 ntBASIC5.49□□□□□ -1.53
RXRBP28702 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.49□□□□□ -1.53
RXRBP28702 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 AC093775.1-201ENST00000624154 1868 ntBASIC5.49□□□□□ -1.53
RXRBP28702 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
RXRBP28702 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RXRBP28702 AL445437.1-201ENST00000623157 3087 ntBASIC5.49□□□□□ -1.53
RXRBP28702 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 API5P2-201ENST00000397055 1498 ntBASIC5.48□□□□□ -1.53
RXRBP28702 SNORA51.6-201ENST00000384151 125 ntBASIC5.48□□□□□ -1.53
RXRBP28702 SNORD3H-201ENST00000384486 214 ntBASIC5.48□□□□□ -1.53
RXRBP28702 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 AC016769.3-201ENST00000396562 315 ntBASIC5.48□□□□□ -1.53
RXRBP28702 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.48□□□□□ -1.53
RXRBP28702 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 AC020550.1-201ENST00000447385 163 ntBASIC5.48□□□□□ -1.53
RXRBP28702 BTF3P6-201ENST00000448054 499 ntBASIC5.48□□□□□ -1.53
RXRBP28702 HMGN3P1-201ENST00000453847 193 ntBASIC5.48□□□□□ -1.53
RXRBP28702 RPL30P15-201ENST00000457129 321 ntBASIC5.48□□□□□ -1.53
RXRBP28702 CEACAMP4-201ENST00000457676 421 ntBASIC5.48□□□□□ -1.53
RXRBP28702 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.48□□□□□ -1.53
RXRBP28702 RNU6-1218P-201ENST00000458990 108 ntBASIC5.48□□□□□ -1.53
RXRBP28702 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.48□□□□□ -1.53
RXRBP28702 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 RNU6-976P-201ENST00000516086 111 ntBASIC5.48□□□□□ -1.53
RXRBP28702 RNU6-1038P-201ENST00000516516 104 ntBASIC5.48□□□□□ -1.53
RXRBP28702 HMGB1P19-201ENST00000517578 577 ntBASIC5.48□□□□□ -1.53
RXRBP28702 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 AP000907.2-201ENST00000530827 353 ntBASIC5.48□□□□□ -1.53
RXRBP28702 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.48□□□□□ -1.53
RXRBP28702 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 AC087499.8-201ENST00000578406 226 ntBASIC5.48□□□□□ -1.53
RXRBP28702 AC006272.2-201ENST00000594725 163 ntBASIC5.48□□□□□ -1.53
RXRBP28702 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.48□□□□□ -1.53
RXRBP28702 AC007485.1-201ENST00000616755 206 ntBASIC5.48□□□□□ -1.53
RXRBP28702 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.48□□□□□ -1.53
RXRBP28702 AC116096.1-201ENST00000566804 2314 ntBASIC5.48□□□□□ -1.53
RXRBP28702 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RXRBP28702 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.48□□□□□ -1.53
RXRBP28702 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.47□□□□□ -1.53
RXRBP28702 AC104623.2-202ENST00000623477 4002 ntBASIC5.47□□□□□ -1.53
RXRBP28702 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RXRBP28702 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RXRBP28702 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RXRBP28702 TRIM51GP-201ENST00000534741 1350 ntBASIC5.47□□□□□ -1.53
RXRBP28702 Y_RNA.378-201ENST00000365652 113 ntBASIC5.47□□□□□ -1.53
RXRBP28702 RNU6-301P-201ENST00000384277 107 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AL139397.2-201ENST00000404529 772 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AL080315.1-201ENST00000406055 466 ntBASIC5.47□□□□□ -1.53
RXRBP28702 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.47□□□□□ -1.53
RXRBP28702 AC137499.1-201ENST00000427602 88 ntBASIC5.47□□□□□ -1.53
RXRBP28702 MTATP6P16-201ENST00000434543 526 ntBASIC5.47□□□□□ -1.53
RXRBP28702 RPL12P46-201ENST00000436610 195 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AL118520.1-201ENST00000450770 291 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AC104308.1-201ENST00000454621 333 ntBASIC5.47□□□□□ -1.53
RXRBP28702 RPS29P15-201ENST00000458329 171 ntBASIC5.47□□□□□ -1.53
RXRBP28702 PABPC1P3-201ENST00000469174 459 ntBASIC5.47□□□□□ -1.53
RXRBP28702 RPL7P43-201ENST00000478876 753 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AC109635.4-202ENST00000531666 412 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AC010653.1-201ENST00000571108 881 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.47□□□□□ -1.53
RXRBP28702 MIR4775-201ENST00000581168 75 ntBASIC5.47□□□□□ -1.53
RXRBP28702 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RXRBP28702 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.47□□□□□ -1.53
RXRBP28702 AL390240.1-201ENST00000612950 384 ntBASIC5.47□□□□□ -1.53
RXRBP28702 uc_338.12-201ENST00000616344 181 ntBASIC5.47□□□□□ -1.53
RXRBP28702 AL162373.1-201ENST00000620433 407 ntBASIC5.47□□□□□ -1.53
RXRBP28702 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RXRBP28702 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RXRBP28702 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.46□□□□□ -1.53
RXRBP28702 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.46□□□□□ -1.53
RXRBP28702 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
RXRBP28702 AC116667.1-201ENST00000604855 2072 ntBASIC5.46□□□□□ -1.53
RXRBP28702 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RXRBP28702 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RXRBP28702 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RXRBP28702 Y_RNA.176-201ENST00000363815 109 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AL606923.1-201ENST00000406616 190 ntBASIC5.46□□□□□ -1.54
RXRBP28702 SNORA3.3-201ENST00000408712 125 ntBASIC5.46□□□□□ -1.54
RXRBP28702 RNU6-954P-201ENST00000411355 107 ntBASIC5.46□□□□□ -1.54
RXRBP28702 AC097713.2-201ENST00000430199 356 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms