Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
BDNFP23560 CYCSP32-201ENST00000440548 321 ntBASIC3.54□□□□□ -1.84
BDNFP23560 UBBP3-201ENST00000445497 241 ntBASIC3.54□□□□□ -1.84
BDNFP23560 RPL37P4-201ENST00000448908 268 ntBASIC3.54□□□□□ -1.84
BDNFP23560 MRPS31P2-201ENST00000451581 518 ntBASIC3.54□□□□□ -1.84
BDNFP23560 RPL36AP51-201ENST00000487216 318 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC026801.1-201ENST00000497178 464 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 RNU6-678P-201ENST00000516832 109 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AP003461.1-201ENST00000528866 78 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.54□□□□□ -1.84
BDNFP23560 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.54□□□□□ -1.84
BDNFP23560 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 AP001004.1-201ENST00000582468 324 ntBASIC3.54□□□□□ -1.84
BDNFP23560 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 MIR4999-201ENST00000585029 91 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 AC008277.2-201ENST00000605196 797 ntBASIC3.54□□□□□ -1.84
BDNFP23560 OR10AB1P-201ENST00000609613 938 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC004696.1-201ENST00000614345 607 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC034102.8-201ENST00000615146 484 ntBASIC3.54□□□□□ -1.84
BDNFP23560 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.54□□□□□ -1.84
BDNFP23560 FRG1KP-201ENST00000623592 341 ntBASIC3.54□□□□□ -1.84
BDNFP23560 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
BDNFP23560 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.54□□□□□ -1.84
BDNFP23560 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
BDNFP23560 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.53□□□□□ -1.84
BDNFP23560 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
BDNFP23560 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 RNU6-884P-201ENST00000363889 107 ntBASIC3.53□□□□□ -1.84
BDNFP23560 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.53□□□□□ -1.84
BDNFP23560 DYNLT3P1-201ENST00000378574 347 ntBASIC3.53□□□□□ -1.84
BDNFP23560 RNU2-62P-201ENST00000410868 191 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC126124.2-201ENST00000413542 321 ntBASIC3.53□□□□□ -1.84
BDNFP23560 RPL23AP39-201ENST00000415533 405 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC096649.2-201ENST00000416186 393 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.53□□□□□ -1.84
BDNFP23560 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 AC006366.1-201ENST00000422002 759 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AL445669.1-201ENST00000426743 755 ntBASIC3.53□□□□□ -1.84
BDNFP23560 ELOCP14-201ENST00000428070 331 ntBASIC3.53□□□□□ -1.84
BDNFP23560 ELOCP7-201ENST00000439968 331 ntBASIC3.53□□□□□ -1.84
BDNFP23560 RPS3AP12-201ENST00000443616 753 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC008264.1-201ENST00000447612 367 ntBASIC3.53□□□□□ -1.84
BDNFP23560 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.53□□□□□ -1.84
BDNFP23560 SUMO2P6-201ENST00000505273 288 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.53□□□□□ -1.84
BDNFP23560 SNORA70.24-201ENST00000517233 118 ntBASIC3.53□□□□□ -1.84
BDNFP23560 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.53□□□□□ -1.84
BDNFP23560 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 AC010546.1-201ENST00000569391 485 ntBASIC3.53□□□□□ -1.84
BDNFP23560 MIR5195-201ENST00000583555 115 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 HMGN2P15-201ENST00000585707 270 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.53□□□□□ -1.84
BDNFP23560 AL355598.1-201ENST00000604169 202 ntBASIC3.53□□□□□ -1.84
BDNFP23560 BCRP9-201ENST00000605312 388 ntBASIC3.53□□□□□ -1.84
BDNFP23560 MIR7112-201ENST00000616126 65 ntBASIC3.53□□□□□ -1.84
BDNFP23560 AC007490.1-201ENST00000624321 703 ntBASIC3.53□□□□□ -1.84
BDNFP23560 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
BDNFP23560 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
BDNFP23560 CR383658.2-201ENST00000547576 1525 ntBASIC3.53□□□□□ -1.84
BDNFP23560 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
BDNFP23560 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.52□□□□□ -1.85
BDNFP23560 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BDNFP23560 RNU6-1167P-201ENST00000363227 94 ntBASIC3.52□□□□□ -1.85
BDNFP23560 RPL7P8-201ENST00000411964 730 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AC063979.1-201ENST00000415539 377 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.52□□□□□ -1.85
BDNFP23560 GTF2IP20-201ENST00000431663 360 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.52□□□□□ -1.85
BDNFP23560 LARP1BP3-201ENST00000437229 869 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 RPL23AP67-201ENST00000465341 474 ntBASIC3.52□□□□□ -1.85
BDNFP23560 RN7SL807P-201ENST00000470923 297 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AC128713.1-201ENST00000471495 306 ntBASIC3.52□□□□□ -1.85
BDNFP23560 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.52□□□□□ -1.85
BDNFP23560 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.52□□□□□ -1.85
BDNFP23560 SNORA31.18-201ENST00000517043 134 ntBASIC3.52□□□□□ -1.85
BDNFP23560 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.52□□□□□ -1.85
BDNFP23560 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BDNFP23560 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 ISCA1P3-201ENST00000577104 373 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 AC103810.1-201ENST00000579873 453 ntBASIC3.52□□□□□ -1.85
BDNFP23560 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.52□□□□□ -1.85
BDNFP23560 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.52□□□□□ -1.85
BDNFP23560 AP000811.1-201ENST00000603803 651 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms