Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF4P23510 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 DHFRP3-201ENST00000455595 559 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 RN7SL303P-201ENST00000469773 251 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF4P23510 AC103843.2-201ENST00000530523 682 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.72□□□□□ -1.81
TNFSF4P23510 HIGD1AP1-201ENST00000550979 275 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF4P23510 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 MIR4703-201ENST00000577728 79 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF4P23510 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
TNFSF4P23510 AC008752.3-201ENST00000588113 712 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.72□□□□□ -1.81
TNFSF4P23510 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.72□□□□□ -1.81
TNFSF4P23510 IPO5P1-202ENST00000600039 287 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AL139395.1-201ENST00000603662 160 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 HSPE1P7-201ENST00000604681 321 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AC008945.2-201ENST00000606056 604 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 MIR15A-201ENST00000607334 83 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AL021997.2-201ENST00000615674 271 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AL138721.1-201ENST00000616756 179 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.72□□□□□ -1.81
TNFSF4P23510 AL445363.3-201ENST00000623080 671 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 MIR1321-201ENST00000637766 79 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 AC004972.1-201ENST00000623934 2209 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 LARP1BP1-201ENST00000506036 1359 ntBASIC3.72□□□□□ -1.81
TNFSF4P23510 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF4P23510 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TNFSF4P23510 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
TNFSF4P23510 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TNFSF4P23510 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF4P23510 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TNFSF4P23510 RNA5SP509-201ENST00000364577 119 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RNU4-12P-201ENST00000365233 139 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF4P23510 RNU6-780P-201ENST00000391030 104 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL591416.1-201ENST00000404015 867 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 MIR548F1-201ENST00000408667 84 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RNU4-46P-201ENST00000410818 138 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RN7SKP216-201ENST00000411050 312 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RPL30P2-201ENST00000414021 291 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 RBMY1KP-201ENST00000423480 476 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 MTATP6P13-201ENST00000438531 667 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AL353748.1-201ENST00000440753 474 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 ELOCP23-201ENST00000452014 332 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC011276.1-201ENST00000469688 323 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RPL7L1P8-201ENST00000469911 741 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 TRBV1-201ENST00000476502 284 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL163973.1-201ENST00000484753 577 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AC109927.2-201ENST00000506416 303 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AC117522.3-201ENST00000507974 584 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 RBBP4P6-201ENST00000508098 202 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 PARP4P3-201ENST00000510265 317 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.71□□□□□ -1.82
TNFSF4P23510 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFSF4P23510 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC109635.3-201ENST00000529536 185 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL121576.1-201ENST00000556055 276 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 MTND6P33-201ENST00000571794 183 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC025165.5-201ENST00000602802 578 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL162413.1-201ENST00000603198 110 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AL138889.2-201ENST00000603883 242 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AL354950.2-201ENST00000617939 290 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AL512643.1-201ENST00000635735 524 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 Z99571.1-201ENST00000636677 394 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AL672167.1-203ENST00000641299 2975 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 AC006020.1-201ENST00000420179 1854 ntBASIC3.71□□□□□ -1.82
TNFSF4P23510 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TNFSF4P23510 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TNFSF4P23510 LINC02471-203ENST00000641941 4752 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF4P23510 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.7□□□□□ -1.82
TNFSF4P23510 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TNFSF4P23510 MIR331-201ENST00000362302 94 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 Y_RNA.255-201ENST00000364581 97 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 SNORA56-201ENST00000383966 129 ntBASIC3.7□□□□□ -1.82
TNFSF4P23510 Y_RNA.450-201ENST00000384198 113 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms